C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription elongation factor A (SII), 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001604 Tcea3 10090 + 4:136247729-136274898 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102533 Tcea3-001 136247952-136274898 protein_coding
  ENSMUST00000136812 Tcea3-002 136247729-136271304 processed_transcript
  ENSMUST00000143942 Tcea3-003 136247973-136264484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102533ENSMUST00000136812ENSMUST00000143942
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102533 1.023±0.23 0.115±0.03 23.596±2.59 0.226±0.10 3.739±3.95 8.153±1.93 17.188±4.85 18.942±5.37 8.437±4.00 4.203±0.61 163.191±7.60 3.185±2.38 3.293±2.65 0.263±0.06
ENSMUST00000136812 N/A 0.228±0.14 N/A 0.637±0.00 1.904±0.00 N/A N/A N/A N/A N/A N/A 3.607±0.00 0.916±0.49 0.237±0.19
ENSMUST00000143942 0.495±0.00 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.332±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0032784 IEA regulation of DNA-templated transcription, elongation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004724 tcea3 transcription elongation factor A (SII), 3 protein_coding Danio_rerio
ENSG00000204219 TCEA3 transcription elongation factor A (SII), 3 protein_coding Homo_sapiens

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