C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor A (SII), 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102533 Tcea3-001 ENSMUSG00000001604 10090 + 4:136247952-136274898 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102533 1.023±0.23 0.115±0.03 23.596±2.59 0.226±0.10 3.739±3.95 8.153±1.93 17.188±4.85 18.942±5.37 8.437±4.00 4.203±0.61 163.191±7.60 3.185±2.38 3.293±2.65 0.263±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0032784 IEA regulation of DNA-templated transcription, elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374601 TCEA3-006 protein_coding Homo_sapiens 0 556
ENST00000374602 TCEA3-004 retained_intron Homo_sapiens 0 418
ENST00000450454 TCEA3-001 protein_coding Homo_sapiens 0 1315
ENST00000461794 TCEA3-003 protein_coding Homo_sapiens 0 420
ENST00000476978 TCEA3-002 protein_coding Homo_sapiens 0 316

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