C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001674 Ddx18 10090 - 1:121553835-121567989 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001724 Ddx18-001 121553835-121567989 protein_coding
  ENSMUST00000131471 Ddx18-002 121564596-121567722 processed_transcript
  ENSMUST00000134417 Ddx18-004 121557405-121560271 protein_coding
  ENSMUST00000148809 Ddx18-003 121555146-121559215 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001724ENSMUST00000148809
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001724 3.717±0.64 1.511±0.20 15.038±1.72 8.794±4.62 3.461±0.85 2.403±0.89 2.958±0.40 4.970±0.67 13.831±12.55 3.781±0.36 5.275±0.30 5.213±4.35 14.805±6.09 4.071±1.56
ENSMUST00000148809 10.435±2.79 6.347±2.71 6.918±0.00 8.013±1.57 5.534±1.66 5.938±1.91 4.210±1.58 10.980±1.92 8.609±3.92 12.921±2.47 2.670±0.00 8.235±2.83 14.743±2.90 13.763±1.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005730 ISS nucleolus
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030789 ddx18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein_coding Danio_rerio
ENSG00000088205 DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein_coding Homo_sapiens

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