C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000088205 DDX18 9606 + 2:117814650-117832379 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263239 DDX18-001 117814650-117832379 protein_coding
  ENST00000415038 DDX18-003 117822147-117828965 protein_coding
  ENST00000461443 DDX18-004 117824997-117825983 retained_intron
  ENST00000474694 DDX18-006 117815058-117824599 processed_transcript
  ENST00000476149 DDX18-005 117824337-117832370 retained_intron
  ENST00000489933 DDX18-002 117821976-117822780 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263239
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263239 9.027±0.00 16.362±0.00 0.861±0.00 4.535±0.17 7.686±0.91 8.387±2.44 3.324±2.25 6.677±4.35 4.478±3.09 6.646±0.36 2.719±1.18 22.629±12.56 11.010±4.26 15.130±5.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WU CIL_0002WU_0002 CGP 2:117814650-118014133

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004004 TAS ATP-dependent RNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005730 IDA nucleolus
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030789 ddx18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein_coding Danio_rerio
ENSMUSG00000001674 Ddx18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein_coding Mus_musculus

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