C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001724 Ddx18-001 ENSMUSG00000001674 10090 - 1:121553835-121567989 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001724
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001724 3.717±0.64 1.511±0.20 15.038±1.72 8.794±4.62 3.461±0.85 2.403±0.89 2.958±0.40 4.970±0.67 13.831±12.55 3.781±0.36 5.275±0.30 5.213±4.35 14.805±6.09 4.071±1.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005730 ISS nucleolus
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263239 DDX18-001 protein_coding Homo_sapiens 0 1725
ENST00000415038 DDX18-003 protein_coding Homo_sapiens 0 468
ENST00000450119 DDX18P6-001 processed_pseudogene Homo_sapiens 0 1437
ENST00000461443 DDX18-004 retained_intron Homo_sapiens 0 318
ENST00000474694 DDX18-006 processed_transcript Homo_sapiens 0 699
ENST00000476149 DDX18-005 retained_intron Homo_sapiens 0 684
ENST00000489933 DDX18-002 retained_intron Homo_sapiens 0 239
ENST00000534547 DDX18P5-001 processed_pseudogene Homo_sapiens 0 1164
ENST00000558620 RP11-568G20.2-001 processed_pseudogene Homo_sapiens 0 1208

Loading