C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: isocitrate dehydrogenase 3 (NAD+), gamma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002010 Idh3g 10090 - X:73778963-73786897 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052761 Idh3g-001 73778963-73786897 protein_coding
  ENSMUST00000129070 Idh3g-008 73779043-73780897 retained_intron
  ENSMUST00000129367 Idh3g-004 73780588-73782219 retained_intron
  ENSMUST00000130119 Idh3g-006 73780036-73780812 retained_intron
  ENSMUST00000140944 Idh3g-009 73780074-73786622 processed_transcript
  ENSMUST00000142707 Idh3g-005 73780421-73781707 retained_intron
  ENSMUST00000145341 Idh3g-003 73780979-73782368 processed_transcript
  ENSMUST00000148419 Idh3g-007 73779670-73780696 retained_intron
  ENSMUST00000156299 Idh3g-002 73778963-73786897 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052761ENSMUST00000129070ENSMUST00000129367ENSMUST00000156299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052761 205.319±64.80 211.312±3.62 99.926±6.39 73.588±22.22 237.115±85.45 123.433±5.69 468.389±13.89 336.203±9.81 85.803±16.93 74.859±7.56 175.549±5.81 118.240±28.59 53.216±32.60 12.024±5.24
ENSMUST00000129070 N/A N/A N/A N/A 155.131±103.01 N/A N/A N/A N/A N/A N/A 66.948±14.53 N/A N/A
ENSMUST00000129367 N/A N/A N/A 60.173±0.00 N/A N/A N/A N/A N/A N/A N/A 56.516±0.00 28.531±13.23 3.441±0.00
ENSMUST00000156299 15.364±0.09 N/A 13.109±0.00 13.383±4.51 N/A N/A N/A N/A 9.124±0.46 11.661±1.63 N/A 20.603±4.77 5.730±0.00 2.181±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UV CIL_0001UV_0002 CGP X:73774405-73786897
CIL_0001UU CIL_0001UU_0002 CGP X:73778963-73790830

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004449 ISS isocitrate dehydrogenase (NAD+) activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005739 ISS mitochondrion
GO:0006099 IEA tricarboxylic acid cycle
GO:0006102 ISS isocitrate metabolic process
GO:0051287 IEA NAD binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023648 idh3g isocitrate dehydrogenase 3 (NAD+) gamma protein_coding Danio_rerio
ENSG00000067829 IDH3G isocitrate dehydrogenase 3 (NAD+) gamma protein_coding Homo_sapiens

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