C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: isocitrate dehydrogenase 3 (NAD+) gamma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000067829 IDH3G 9606 - X:153785766-153794523 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217901 IDH3G-005 153785766-153794523 protein_coding
  ENST00000370092 IDH3G-014 153785766-153794512 protein_coding
  ENST00000370093 IDH3G-008 153785767-153794381 protein_coding
  ENST00000427365 IDH3G-007 153785798-153794356 protein_coding
  ENST00000444338 IDH3G-010 153787051-153789790 protein_coding
  ENST00000444450 IDH3G-003 153786801-153794359 protein_coding
  ENST00000454076 IDH3G-006 153785767-153787553 protein_coding
  ENST00000461215 IDH3G-001 153787826-153794346 processed_transcript
  ENST00000491235 IDH3G-004 153789838-153794325 processed_transcript
  ENST00000495356 IDH3G-012 153787391-153794335 processed_transcript
  ENST00000497043 IDH3G-002 153787127-153794356 processed_transcript
  ENST00000619865 IDH3G-201 153785767-153794523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000217901ENST00000444338ENST00000444450ENST00000454076ENST00000619865
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000217901 29.550±0.00 N/A 14.769±6.39 21.251±0.00 22.526±0.00 30.552±0.00 40.583±0.00 37.488±0.00 32.616±26.83 32.722±11.11 29.537±14.12 23.704±17.25
ENST00000444338 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.696±0.00 N/A N/A
ENST00000444450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.506±0.00 7.371±0.00
ENST00000454076 N/A N/A N/A N/A N/A N/A 2.587±0.00 N/A 8.560±0.00 N/A N/A N/A
ENST00000619865 N/A 2.467±0.00 N/A N/A 3.088±0.00 2.683±0.00 N/A N/A N/A N/A 6.972±0.00 7.846±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UV CIL_0001UV_0001 CGP X:153776412-153794523
CIL_0001UU CIL_0001UU_0001 CGP X:153785766-153798505

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004449 IEA:ISS isocitrate dehydrogenase (NAD+) activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005739 IDA:ISS mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0005975 NAS carbohydrate metabolic process
GO:0006099 IEA:TAS tricarboxylic acid cycle
GO:0006102 ISS isocitrate metabolic process
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023648 idh3g isocitrate dehydrogenase 3 (NAD+) gamma protein_coding Danio_rerio
ENSMUSG00000002010 Idh3g isocitrate dehydrogenase 3 (NAD+), gamma protein_coding Mus_musculus

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