C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001UV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184343-ENSG00000067829 CGP 9606 X:153776412-153794523
GeneTranscriptPositionBiotype
ENSG00000067829 (IDH3G)
isocitrate dehydrogenase 3 (NAD+) gamma 		ENST00000217901 (IDH3G-005) 153785766-153794523 protein_coding
ENST00000370092 (IDH3G-014) 153785766-153794512 protein_coding
ENST00000370093 (IDH3G-008) 153785767-153794381 protein_coding
ENST00000427365 (IDH3G-007) 153785798-153794356 protein_coding
ENST00000444338 (IDH3G-010) 153787051-153789790 protein_coding
ENST00000444450 (IDH3G-003) 153786801-153794359 protein_coding
ENST00000454076 (IDH3G-006) 153785767-153787553 protein_coding
ENST00000461215 (IDH3G-001) 153787826-153794346 processed_transcript
ENST00000491235 (IDH3G-004) 153789838-153794325 processed_transcript
ENST00000495356 (IDH3G-012) 153787391-153794335 processed_transcript
ENST00000497043 (IDH3G-002) 153787127-153794356 processed_transcript
ENST00000619865 (IDH3G-201) 153785767-153794523 protein_coding
ENSG00000184343 (SRPK3)
SRSF protein kinase 3 		ENST00000370100 (SRPK3-002) 153781116-153785728 protein_coding
ENST00000370101 (SRPK3-006) 153781041-153785728 protein_coding
ENST00000370104 (SRPK3-005) 153781039-153785524 protein_coding
ENST00000370108 (SRPK3-001) 153781039-153785730 protein_coding
ENST00000393786 (SRPK3-201) 153781001-153785732 protein_coding
ENST00000430541 (SRPK3-003) 153781116-153782869 protein_coding
ENST00000458681 (SRPK3-004) 153784704-153785404 protein_coding
ENST00000489426 (SRPK3-007) 153776412-153785728 protein_coding
ENSG00000198753 (PLXNB3)
plexin B3 		ENST00000361971 (PLXNB3-001) 153764256-153779341 protein_coding
ENST00000411613 (PLXNB3-008) 153774759-153776956 protein_coding
ENST00000448847 (PLXNB3-002) 153777517-153778301 protein_coding
ENST00000455214 (PLXNB3-003) 153775976-153777032 protein_coding
ENST00000469190 (PLXNB3-006) 153778191-153779340 processed_transcript
ENST00000472415 (PLXNB3-007) 153778382-153779340 processed_transcript
ENST00000482654 (PLXNB3-005) 153774929-153776399 processed_transcript
ENST00000485980 (PLXNB3-004) 153777242-153778326 processed_transcript
ENST00000538966 (PLXNB3-201) 153764196-153779346 protein_coding
CIL_0001UV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002007-ENSMUSG00000002010 CGP 10090 X:73774405-73786897
GeneTranscriptPositionBiotype
ENSMUSG00000002007 (Srpk3)
serine/arginine-rich protein specific kinase 3 		ENSMUST00000002081 (Srpk3-001) 73774405-73778925 protein_coding
ENSMUST00000136664 (Srpk3-002) 73774405-73778925 retained_intron
ENSMUST00000137045 (Srpk3-003) 73777945-73778602 retained_intron
ENSMUST00000139630 (Srpk3-004) 73777978-73778728 retained_intron
ENSMUSG00000002010 (Idh3g)
isocitrate dehydrogenase 3 (NAD+), gamma 		ENSMUST00000052761 (Idh3g-001) 73778963-73786897 protein_coding
ENSMUST00000129070 (Idh3g-008) 73779043-73780897 retained_intron
ENSMUST00000129367 (Idh3g-004) 73780588-73782219 retained_intron
ENSMUST00000130119 (Idh3g-006) 73780036-73780812 retained_intron
ENSMUST00000140944 (Idh3g-009) 73780074-73786622 processed_transcript
ENSMUST00000142707 (Idh3g-005) 73780421-73781707 retained_intron
ENSMUST00000145341 (Idh3g-003) 73780979-73782368 processed_transcript
ENSMUST00000148419 (Idh3g-007) 73779670-73780696 retained_intron
ENSMUST00000156299 (Idh3g-002) 73778963-73786897 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UV_0001ENSG00000067829ENST00000217901ENST00000370092ENST00000370093ENST00000427365ENST00000444338ENST00000444450ENST00000454076ENST00000461215ENST00000491235ENST00000495356ENST00000497043ENST00000619865ENSG00000184343ENST00000370100ENST00000370101ENST00000370104ENST00000370108ENST00000393786ENST00000430541ENST00000458681ENST00000489426ENSG00000198753ENST00000361971ENST00000411613ENST00000448847ENST00000455214ENST00000469190ENST00000472415ENST00000482654ENST00000485980ENST00000538966CIL_0001UV_0002ENSMUSG00000002007ENSMUST00000002081ENSMUST00000136664ENSMUST00000137045ENSMUST00000139630ENSMUSG00000002010ENSMUST00000052761ENSMUST00000129070ENSMUST00000129367ENSMUST00000130119ENSMUST00000140944ENSMUST00000142707ENSMUST00000145341ENSMUST00000148419ENSMUST00000156299
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UV_0001ENSG00000067829ENST00000217901ENST00000444338ENST00000444450ENST00000454076ENST00000619865ENSG00000184343ENST00000370100ENST00000370101ENST00000370104ENST00000393786ENST00000430541ENST00000489426ENSG00000198753ENST00000361971ENST00000411613ENST00000448847ENST00000455214ENST00000469190ENST00000482654ENST00000485980ENST00000538966CIL_0001UV_0002ENSMUSG00000002007ENSMUST00000002081ENSMUST00000136664ENSMUST00000137045ENSMUST00000139630ENSMUSG00000002010ENSMUST00000052761ENSMUST00000129070ENSMUST00000129367ENSMUST00000156299
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000067829 ENST00000217901 29.550±0.00 N/A N/A 14.769±6.39 21.251±0.00 22.526±0.00 30.552±0.00 40.583±0.00 N/A 37.488±0.00 32.616±26.83 32.722±11.11 29.537±14.12 23.704±17.25
ENST00000370092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.696±0.00 N/A N/A
ENST00000444450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.506±0.00 7.371±0.00
ENST00000454076 N/A N/A N/A N/A N/A N/A N/A 2.587±0.00 N/A N/A 8.560±0.00 N/A N/A N/A
ENST00000461215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619865 N/A N/A 2.467±0.00 N/A N/A 3.088±0.00 2.683±0.00 N/A N/A N/A N/A N/A 6.972±0.00 7.846±0.00
ENSG00000184343 ENST00000370100 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 3.981±0.00 0.157±0.00 N/A N/A
ENST00000370101 N/A N/A N/A N/A 0.774±0.00 N/A 3.872±3.57 N/A N/A N/A 9.742±3.91 0.170±0.00 N/A N/A
ENST00000370104 N/A N/A N/A N/A 1.049±0.00 N/A 2.552±2.22 N/A N/A N/A 10.652±4.12 N/A 0.142±0.00 N/A
ENST00000370108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.965±0.00 N/A N/A N/A
ENST00000430541 N/A N/A N/A N/A 0.769±0.00 N/A 1.170±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000458681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489426 N/A 0.697±0.00 N/A N/A 0.520±0.00 N/A N/A 0.188±0.00 N/A N/A N/A 0.263±0.00 N/A 0.920±0.00
ENSG00000198753 ENST00000361971 N/A 0.726±0.00 0.014±0.00 5.169±3.60 0.322±0.19 1.468±1.18 N/A N/A N/A 0.132±0.00 N/A 0.605±0.08 0.129±0.05 2.519±0.75
ENST00000411613 N/A N/A 0.717±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448847 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.951±0.00 N/A N/A 0.258±0.00 N/A
ENST00000455214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.444±0.00 11.927±0.00
ENST00000469190 1.829±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.810±0.00 N/A N/A
ENST00000472415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482654 N/A N/A 0.098±0.00 N/A 0.724±0.00 1.352±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485980 N/A N/A N/A N/A 0.752±0.00 7.613±0.00 N/A N/A N/A 0.221±0.00 N/A N/A N/A N/A
ENST00000538966 0.578±0.00 N/A N/A 5.376±0.00 N/A 1.224±0.00 N/A N/A 0.398±0.00 N/A N/A 0.441±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002007 ENSMUST00000002081 0.530±0.47 0.252±0.14 2.020±0.33 0.103±0.03 6.418±1.79 1.371±0.15 15.758±1.22 0.608±0.14 0.182±0.20 2.513±0.50 16.315±1.32 0.900±0.45 0.080±0.01 0.121±0.07
ENSMUST00000136664 0.370±0.14 0.292±0.15 0.799±0.00 0.598±0.65 2.090±0.94 0.746±0.00 4.113±0.17 0.465±0.00 0.094±0.04 1.295±0.49 2.977±0.31 0.396±0.16 0.058±0.00 0.062±0.02
ENSMUST00000137045 3.086±0.00 0.252±0.03 N/A 0.167±0.00 N/A 1.873±0.00 N/A 0.809±0.00 0.145±0.05 1.900±0.00 N/A 0.607±0.00 0.122±0.00 0.247±0.00
ENSMUST00000139630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.475±0.00 0.360±0.00 N/A
ENSMUSG00000002010 ENSMUST00000052761 205.319±64.80 211.312±3.62 99.926±6.39 73.588±22.22 237.115±85.45 123.433±5.69 468.389±13.89 336.203±9.81 85.803±16.93 74.859±7.56 175.549±5.81 118.240±28.59 53.216±32.60 12.024±5.24
ENSMUST00000129070 N/A N/A N/A N/A 155.131±103.01 N/A N/A N/A N/A N/A N/A 66.948±14.53 N/A N/A
ENSMUST00000129367 N/A N/A N/A 60.173±0.00 N/A N/A N/A N/A N/A N/A N/A 56.516±0.00 28.531±13.23 3.441±0.00
ENSMUST00000130119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156299 15.364±0.09 N/A 13.109±0.00 13.383±4.51 N/A N/A N/A N/A 9.124±0.46 11.661±1.63 N/A 20.603±4.77 5.730±0.00 2.181±0.11

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