C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 39 (metal ion transporter), member 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002105 Slc39a13 10090 - 2:91061791-91070417 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073575 Slc39a13-001 91061791-91070417 protein_coding
  ENSMUST00000079976 Slc39a13-002 91061791-91070229 protein_coding
  ENSMUST00000111436 Slc39a13-012 91062874-91070283 protein_coding
  ENSMUST00000123685 Slc39a13-004 91063405-91070298 processed_transcript
  ENSMUST00000130252 Slc39a13-005 91065581-91070239 processed_transcript
  ENSMUST00000133047 Slc39a13-010 91069118-91070239 processed_transcript
  ENSMUST00000141328 Slc39a13-008 91063125-91064386 processed_transcript
  ENSMUST00000142943 Slc39a13-011 91068431-91068871 processed_transcript
  ENSMUST00000149430 Slc39a13-007 91063122-91065446 processed_transcript
  ENSMUST00000150348 Slc39a13-006 91064641-91066176 processed_transcript
  ENSMUST00000153367 Slc39a13-003 91066046-91070187 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000073575ENSMUST00000079976ENSMUST00000111436ENSMUST00000133047
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000073575 14.455±1.41 15.958±1.66 20.881±4.22 9.166±1.93 13.236±0.85 10.298±1.51 8.183±0.98 14.005±2.17 3.871±0.91 16.824±1.58 14.612±1.67 16.547±0.74
ENSMUST00000079976 11.531±0.83 N/A N/A 8.382±0.00 8.748±1.95 8.281±0.91 6.539±0.19 16.145±2.16 N/A 12.426±0.39 11.873±2.98 15.538±0.00
ENSMUST00000111436 N/A 11.602±0.41 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133047 N/A N/A N/A N/A 26.361±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005385 IC zinc ion transmembrane transporter activity
GO:0005794 IDA Golgi apparatus
GO:0006882 IMP cellular zinc ion homeostasis
GO:0016021 IEA integral component of membrane
GO:0042803 IEA protein homodimerization activity
GO:0048471 IDA perinuclear region of cytoplasm
GO:0061448 IMP connective tissue development
GO:0071577 IMP zinc ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000442 slc39a13 solute carrier family 39 (zinc transporter), member 13 protein_coding Danio_rerio
ENSG00000165915 SLC39A13 solute carrier family 39 (zinc transporter), member 13 protein_coding Homo_sapiens

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