C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (metal ion transporter), member 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073575 Slc39a13-001 ENSMUSG00000002105 10090 - 2:91061791-91070417 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000073575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000073575 14.455±1.41 15.958±1.66 20.881±4.22 9.166±1.93 13.236±0.85 10.298±1.51 8.183±0.98 14.005±2.17 3.871±0.91 16.824±1.58 14.612±1.67 16.547±0.74

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005385 IC zinc ion transmembrane transporter activity
GO:0005794 IDA Golgi apparatus
GO:0006882 IMP cellular zinc ion homeostasis
GO:0048471 IDA perinuclear region of cytoplasm
GO:0061448 IMP connective tissue development
GO:0071577 IMP zinc ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354884 SLC39A13-011 protein_coding Homo_sapiens 0 1243
ENST00000362021 SLC39A13-012 protein_coding Homo_sapiens 0 1147
ENST00000524928 SLC39A13-003 protein_coding Homo_sapiens 0 867
ENST00000526614 SLC39A13-004 protein_coding Homo_sapiens 0 867
ENST00000527091 SLC39A13-005 protein_coding Homo_sapiens 0 486
ENST00000527829 SLC39A13-014 processed_transcript Homo_sapiens 0 322
ENST00000528979 SLC39A13-009 processed_transcript Homo_sapiens 0 222
ENST00000529740 SLC39A13-006 processed_transcript Homo_sapiens 0 390
ENST00000531419 SLC39A13-010 protein_coding Homo_sapiens 0 625
ENST00000531865 SLC39A13-008 protein_coding Homo_sapiens 0 625
ENST00000531974 SLC39A13-007 protein_coding Homo_sapiens 0 486
ENST00000533076 SLC39A13-001 protein_coding Homo_sapiens 0 1223

Loading