C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: damage specific DNA binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002109 Ddb2 10090 - 2:91211572-91236982 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028696 Ddb2-001 91211856-91236982 protein_coding
  ENSMUST00000111352 Ddb2-002 91211603-91236885 protein_coding
  ENSMUST00000135927 Ddb2-005 91211621-91236960 processed_transcript
  ENSMUST00000150427 Ddb2-003 91211588-91236907 processed_transcript
  ENSMUST00000152277 Ddb2-004 91211572-91235331 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastLiverLungOvaryPlacentaTestisENSMUST00000028696ENSMUST00000111352ENSMUST00000135927ENSMUST00000150427ENSMUST00000152277
Transcript ID Adrenal Bladder Brain Breast Liver Lung Ovary Placenta Testis
ENSMUST00000028696 10.780±1.58 8.710±0.00 N/A N/A 3.342±0.00 N/A N/A N/A 4.630±0.51
ENSMUST00000111352 N/A 7.423±1.17 N/A 9.234±1.46 2.845±0.54 5.449±0.00 N/A N/A 2.750±0.43
ENSMUST00000135927 N/A N/A N/A N/A N/A N/A 11.613±0.00 3.923±1.29 3.936±0.00
ENSMUST00000150427 N/A N/A 7.725±0.91 N/A N/A N/A N/A N/A N/A
ENSMUST00000152277 N/A 5.474±0.34 5.377±0.00 7.195±0.00 3.510±0.56 N/A 6.509±0.00 3.595±0.10 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 IEA protein polyubiquitination
GO:0003684 IEA damaged DNA binding
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0006290 IMP pyrimidine dimer repair
GO:0009411 IEA response to UV
GO:0031465 IEA Cul4B-RING E3 ubiquitin ligase complex
GO:0035518 IEA histone H2A monoubiquitination
GO:0043234 IEA protein complex
GO:0051865 IEA protein autoubiquitination
GO:0070914 IEA UV-damage excision repair

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041140 ddb2 damage-specific DNA binding protein 2 protein_coding Danio_rerio
ENSG00000134574 DDB2 damage-specific DNA binding protein 2, 48kDa protein_coding Homo_sapiens

Loading