C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: armadillo repeat containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002343 Armc6 10090 - 8:70220172-70234466 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019679 Armc6-001 70220172-70234466 protein_coding
  ENSMUST00000130319 Armc6-004 70225318-70234126 protein_coding
  ENSMUST00000135931 Armc6-002 70224610-70234449 retained_intron
  ENSMUST00000136666 Armc6-006 70220477-70222290 retained_intron
  ENSMUST00000139765 Armc6-005 70220198-70222789 retained_intron
  ENSMUST00000147387 Armc6-003 70223186-70225177 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000019679ENSMUST00000136666
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000019679 9.824±1.68 10.133±1.75 25.960±3.50 6.623±0.26 7.491±0.86 3.487±0.60 5.176±0.65 5.969±2.89 6.530±0.86 13.037±1.13 7.847±2.65
ENSMUST00000136666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.449±9.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BC CIL_0006BC_0002 CGP 8:70184340-70234466

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060763 ARMC6 armadillo repeat containing 6 protein_coding Danio_rerio
ENSG00000105676 ARMC6 armadillo repeat containing 6 protein_coding Homo_sapiens

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