C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: armadillo repeat containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019679 Armc6-001 ENSMUSG00000002343 10090 - 8:70220172-70234466 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000019679
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000019679 9.824±1.68 10.133±1.75 25.960±3.50 6.623±0.26 7.491±0.86 3.487±0.60 5.176±0.65 5.969±2.89 6.530±0.86 13.037±1.13 7.847±2.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BC CIL_0006BC_0002 CGP 8:70184340-70234466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269932 ARMC6-005 protein_coding Homo_sapiens 0 1048
ENST00000392335 ARMC6-002 protein_coding Homo_sapiens 0 1048
ENST00000392336 ARMC6-006 protein_coding Homo_sapiens 0 1048
ENST00000535478 ARMC6-020 protein_coding Homo_sapiens 0 200
ENST00000535612 ARMC6-001 protein_coding Homo_sapiens 0 1048
ENST00000535795 ARMC6-022 protein_coding Homo_sapiens 0 200
ENST00000540634 ARMC6-021 protein_coding Homo_sapiens 0 211
ENST00000546344 ARMC6-003 protein_coding Homo_sapiens 0 907

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