C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome segregation 1-like (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002718 Cse1l 10090 + 2:166906040-166946389 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002790 Cse1l-001 166906059-166946389 protein_coding
  ENSMUST00000129061 Cse1l-005 166940833-166941819 retained_intron
  ENSMUST00000132402 Cse1l-004 166927565-166932403 retained_intron
  ENSMUST00000135139 Cse1l-003 166927724-166935087 retained_intron
  ENSMUST00000145819 Cse1l-002 166934755-166944853 retained_intron
  ENSMUST00000163437 Cse1l-008 166927530-166945808 protein_coding
  ENSMUST00000163917 Cse1l-009 166937093-166941250 retained_intron
  ENSMUST00000164974 Cse1l-012 166934782-166941454 nonsense_mediated_decay
  ENSMUST00000166871 Cse1l-011 166927768-166937421 processed_transcript
  ENSMUST00000168599 Cse1l-007 166915180-166945793 protein_coding
  ENSMUST00000169290 Cse1l-006 166906111-166946101 nonsense_mediated_decay
  ENSMUST00000171410 Cse1l-010 166906040-166944550 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002790ENSMUST00000132402ENSMUST00000168599ENSMUST00000169290ENSMUST00000171410
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002790 11.369±3.23 22.150±3.63 12.726±2.00 27.021±1.55 9.201±1.46 5.403±1.99 9.302±0.67 9.364±1.83 15.332±9.90 8.357±1.40 17.150±1.09 10.227±6.61 25.464±17.16 11.122±4.63
ENSMUST00000132402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.932±0.00
ENSMUST00000168599 N/A N/A N/A 2.360±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169290 2.665±0.54 N/A N/A 2.320±0.00 3.218±1.16 1.556±0.41 1.314±0.00 1.994±0.06 2.028±0.00 3.083±0.17 N/A 4.925±2.24 2.413±0.00 2.382±0.63
ENSMUST00000171410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.777±0.00 13.050±0.00 9.920±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XQ CIL_0001XQ_0002 CGP 2:166805588-166946389
CIL_0001XR CIL_0001XR_0002 CGP 2:166906040-166996299

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding
GO:0016020 IEA membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006963 cse1l chromosome segregation 1-like (S. cerevisiae) protein_coding Danio_rerio
ENSG00000124207 CSE1L CSE1 chromosome segregation 1-like (yeast) protein_coding Homo_sapiens

Loading