C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromatin assembly factor 1, subunit A (p150)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002835 Chaf1a 10090 + 17:56040416-56068026 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002914 Chaf1a-201 56040416-56068026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonLiverOvaryPlacentaTestisENSMUST00000002914
Transcript ID Adipose Brain Colon Liver Ovary Placenta Testis
ENSMUST00000002914 3.894±0.24 5.377±1.10 3.939±0.43 10.797±5.53 8.982±1.91 13.380±11.36 71.540±37.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036Q CIL_00036Q_0002 CGP 17:56016753-56068026
CIL_0001RW CIL_0001RW_0002 CGP 17:56040416-56075028

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0005515 IPI protein binding
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0006335 IEA DNA replication-dependent nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0031497 ISS chromatin assembly
GO:0033186 ISS CAF-1 complex
GO:0042802 IEA identical protein binding
GO:0043234 IEA protein complex
GO:0070087 IEA chromo shadow domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062152 chaf1a chromatin assembly factor 1, subunit A (p150) protein_coding Danio_rerio
ENSG00000167670 CHAF1A chromatin assembly factor 1, subunit A (p150) protein_coding Homo_sapiens

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