C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex AP-1, mu subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003033 Ap1m1 10090 + 8:72240018-72257385 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003117 Ap1m1-001 72240018-72257385 protein_coding
  ENSMUST00000126885 Ap1m1-005 72240323-72251817 protein_coding
  ENSMUST00000145213 Ap1m1-004 72240110-72249881 protein_coding
  ENSMUST00000151546 Ap1m1-002 72252935-72256912 retained_intron
  ENSMUST00000156735 Ap1m1-003 72252855-72256408 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003117ENSMUST00000151546ENSMUST00000156735
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003117 35.947±5.67 33.908±2.58 30.929±1.78 55.785±28.55 35.294±10.34 16.346±4.40 27.303±4.43 31.529±1.73 25.068±7.53 34.276±1.63 9.789±0.96 41.769±15.30 23.155±12.22 140.380±62.71
ENSMUST00000151546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.937±0.00 N/A N/A
ENSMUST00000156735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.886±2.98 5.128±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IP CIL_0000IP_0002 CGP 8:72219730-72257385

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005802 TAS trans-Golgi network
GO:0006886 TAS intracellular protein transport
GO:0016020 IEA membrane
GO:0016192 TAS vesicle-mediated transport
GO:0030131 IEA clathrin adaptor complex
GO:0031410 IEA cytoplasmic vesicle
GO:0032438 IEA melanosome organization
GO:0035646 IEA endosome to melanosome transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020838 AP1M1 adaptor-related protein complex 1, mu 1 subunit protein_coding Danio_rerio
ENSG00000072958 AP1M1 adaptor-related protein complex 1, mu 1 subunit protein_coding Homo_sapiens

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