C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000IP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105058-ENSG00000072958 CGP 9606 19:16185380-16245907
GeneTranscriptPositionBiotype
ENSG00000072958 (AP1M1)
adaptor-related protein complex 1, mu 1 subunit 		ENST00000291439 (AP1M1-001) 16197578-16245907 protein_coding
ENST00000429941 (AP1M1-002) 16197911-16234784 protein_coding
ENST00000444449 (AP1M1-004) 16197934-16235345 protein_coding
ENST00000586461 (AP1M1-013) 16208959-16226746 retained_intron
ENST00000586543 (AP1M1-014) 16227605-16235345 protein_coding
ENST00000586957 (AP1M1-010) 16203463-16206494 retained_intron
ENST00000589782 (AP1M1-011) 16203606-16209256 protein_coding
ENST00000589822 (AP1M1-007) 16197971-16208144 protein_coding
ENST00000589991 (AP1M1-006) 16197913-16208262 retained_intron
ENST00000590263 (AP1M1-005) 16197854-16209041 protein_coding
ENST00000590756 (AP1M1-003) 16197854-16234911 protein_coding
ENST00000590945 (AP1M1-008) 16198143-16206411 protein_coding
ENST00000591775 (AP1M1-009) 16198157-16209085 protein_coding
ENST00000591966 (AP1M1-012) 16208850-16227634 retained_intron
ENST00000592703 (AP1M1-015) 16234044-16234764 retained_intron
ENSG00000105058 (FAM32A)
family with sequence similarity 32, member A 		ENST00000263384 (FAM32A-001) 16185418-16192046 protein_coding
ENST00000585831 (FAM32A-004) 16185433-16191378 nonsense_mediated_decay
ENST00000587351 (FAM32A-005) 16185455-16186649 protein_coding
ENST00000588367 (FAM32A-003) 16185423-16191448 protein_coding
ENST00000589852 (FAM32A-002) 16185380-16191614 protein_coding
ENSG00000275901 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000621370 (Metazoa_SRP.1-341) 16187313-16187566 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0000IP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003039-ENSMUSG00000003033 CGP 10090 8:72219730-72257385
GeneTranscriptPositionBiotype
ENSMUSG00000003033 (Ap1m1)
adaptor-related protein complex AP-1, mu subunit 1 		ENSMUST00000003117 (Ap1m1-001) 72240018-72257385 protein_coding
ENSMUST00000126885 (Ap1m1-005) 72240323-72251817 protein_coding
ENSMUST00000145213 (Ap1m1-004) 72240110-72249881 protein_coding
ENSMUST00000151546 (Ap1m1-002) 72252935-72256912 retained_intron
ENSMUST00000156735 (Ap1m1-003) 72252855-72256408 retained_intron
ENSMUSG00000003039 (Fam32a)
family with sequence similarity 32, member A 		ENSMUST00000003123 (Fam32a-201) 72219730-72223764 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IP_0001ENSG00000072958ENST00000291439ENST00000429941ENST00000444449ENST00000586461ENST00000586543ENST00000586957ENST00000589782ENST00000589822ENST00000589991ENST00000590263ENST00000590756ENST00000590945ENST00000591775ENST00000591966ENST00000592703ENSG00000105058ENST00000263384ENST00000585831ENST00000587351ENST00000588367ENST00000589852ENSG00000275901ENST00000621370CIL_0000IP_0002ENSMUSG00000003033ENSMUST00000003117ENSMUST00000126885ENSMUST00000145213ENSMUST00000151546ENSMUST00000156735ENSMUSG00000003039ENSMUST00000003123
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IP_0001ENSG00000072958ENST00000291439ENST00000429941ENST00000444449ENST00000589782ENST00000589991ENST00000590263ENST00000590756ENSG00000105058ENST00000263384ENST00000588367ENST00000589852ENSG00000275901ENST00000621370CIL_0000IP_0002ENSMUSG00000003033ENSMUST00000003117ENSMUST00000151546ENSMUST00000156735ENSMUSG00000003039ENSMUST00000003123
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000072958 ENST00000291439 N/A N/A 0.093±0.00 N/A N/A 0.108±0.00 0.185±0.08 0.198±0.11 0.209±0.00 0.234±0.00 0.058±0.00 0.616±0.00 N/A 0.452±0.00
ENST00000429941 N/A N/A N/A N/A 1.270±0.00 N/A N/A N/A N/A N/A 1.432±0.00 3.257±0.00 6.356±0.00 8.148±0.00
ENST00000444449 27.124±0.00 15.848±0.00 1.559±0.00 14.578±9.00 11.940±10.59 8.816±7.25 7.622±0.00 12.171±8.47 11.176±9.97 14.967±0.00 14.182±13.01 12.420±8.48 21.003±8.50 28.785±11.22
ENST00000586461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589782 N/A N/A N/A N/A N/A 3.943±0.00 N/A N/A N/A 3.998±0.00 N/A N/A N/A N/A
ENST00000589822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589991 N/A N/A 3.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590263 N/A N/A N/A N/A N/A N/A 1.946±0.00 N/A 3.716±0.00 3.654±0.00 N/A N/A N/A N/A
ENST00000590756 16.984±0.00 9.042±0.00 1.572±0.00 12.470±0.00 15.406±0.00 8.679±0.00 2.245±1.60 5.245±2.42 5.299±4.11 3.994±1.20 9.661±0.00 8.686±6.45 10.622±2.00 12.663±4.44
ENST00000590945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000105058 ENST00000263384 23.306±0.00 33.551±0.00 3.261±0.00 16.171±1.84 16.257±10.02 16.466±6.96 9.048±5.58 24.180±11.08 18.913±10.73 14.759±10.41 9.090±2.41 53.044±47.97 76.263±22.84 30.993±7.65
ENST00000585831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.198±0.00 N/A N/A N/A
ENST00000589852 N/A N/A 0.860±0.00 5.458±0.00 1.257±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275901 ENST00000621370 0.096±0.00 0.947±0.00 N/A 0.497±0.00 0.350±0.00 0.104±0.00 N/A 0.228±0.00 N/A 0.111±0.00 N/A N/A N/A 0.684±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003033 ENSMUST00000003117 35.947±5.67 33.908±2.58 30.929±1.78 55.785±28.55 35.294±10.34 16.346±4.40 27.303±4.43 31.529±1.73 25.068±7.53 34.276±1.63 9.789±0.96 41.769±15.30 23.155±12.22 140.380±62.71
ENSMUST00000126885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.937±0.00 N/A N/A
ENSMUST00000156735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.886±2.98 5.128±0.00 N/A
ENSMUSG00000003039 ENSMUST00000003123 43.812±4.81 11.879±5.66 23.436±10.26 34.424±11.16 27.118±8.87 39.326±10.92 11.054±3.49 40.004±8.64 23.728±9.27 43.092±1.25 3.811±0.45 28.169±14.43 28.898±9.18 10.377±1.98

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