C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 1, mu 1 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000072958 AP1M1 9606 + 19:16197578-16245907 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291439 AP1M1-001 16197578-16245907 protein_coding
  ENST00000429941 AP1M1-002 16197911-16234784 protein_coding
  ENST00000444449 AP1M1-004 16197934-16235345 protein_coding
  ENST00000586461 AP1M1-013 16208959-16226746 retained_intron
  ENST00000586543 AP1M1-014 16227605-16235345 protein_coding
  ENST00000586957 AP1M1-010 16203463-16206494 retained_intron
  ENST00000589782 AP1M1-011 16203606-16209256 protein_coding
  ENST00000589822 AP1M1-007 16197971-16208144 protein_coding
  ENST00000589991 AP1M1-006 16197913-16208262 retained_intron
  ENST00000590263 AP1M1-005 16197854-16209041 protein_coding
  ENST00000590756 AP1M1-003 16197854-16234911 protein_coding
  ENST00000590945 AP1M1-008 16198143-16206411 protein_coding
  ENST00000591775 AP1M1-009 16198157-16209085 protein_coding
  ENST00000591966 AP1M1-012 16208850-16227634 retained_intron
  ENST00000592703 AP1M1-015 16234044-16234764 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000291439ENST00000429941ENST00000444449ENST00000589782ENST00000589991ENST00000590263ENST00000590756
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000291439 N/A N/A 0.093±0.00 N/A N/A 0.108±0.00 0.185±0.08 0.198±0.11 0.209±0.00 0.234±0.00 0.058±0.00 0.616±0.00 N/A 0.452±0.00
ENST00000429941 N/A N/A N/A N/A 1.270±0.00 N/A N/A N/A N/A N/A 1.432±0.00 3.257±0.00 6.356±0.00 8.148±0.00
ENST00000444449 27.124±0.00 15.848±0.00 1.559±0.00 14.578±9.00 11.940±10.59 8.816±7.25 7.622±0.00 12.171±8.47 11.176±9.97 14.967±0.00 14.182±13.01 12.420±8.48 21.003±8.50 28.785±11.22
ENST00000589782 N/A N/A N/A N/A N/A 3.943±0.00 N/A N/A N/A 3.998±0.00 N/A N/A N/A N/A
ENST00000589991 N/A N/A 3.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590263 N/A N/A N/A N/A N/A N/A 1.946±0.00 N/A 3.716±0.00 3.654±0.00 N/A N/A N/A N/A
ENST00000590756 16.984±0.00 9.042±0.00 1.572±0.00 12.470±0.00 15.406±0.00 8.679±0.00 2.245±1.60 5.245±2.42 5.299±4.11 3.994±1.20 9.661±0.00 8.686±6.45 10.622±2.00 12.663±4.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IP CIL_0000IP_0001 CGP 19:16185380-16245907

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005515 IPI:IEA protein binding
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030131 IEA clathrin adaptor complex
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032438 IMP melanosome organization
GO:0032588 TAS trans-Golgi network membrane
GO:0035646 IMP endosome to melanosome transport
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020838 AP1M1 adaptor-related protein complex 1, mu 1 subunit protein_coding Danio_rerio
ENSMUSG00000003033 Ap1m1 adaptor-related protein complex AP-1, mu subunit 1 protein_coding Mus_musculus

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