C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: translocase of inner mitochondrial membrane 50
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003438 Timm50 10090 - 7:28305516-28312072 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081946 Timm50-001 28305516-28312072 protein_coding
  ENSMUST00000131849 Timm50-004 28309506-28312037 retained_intron
  ENSMUST00000134263 Timm50-005 28306428-28308018 retained_intron
  ENSMUST00000135220 Timm50-003 28310217-28312056 retained_intron
  ENSMUST00000136427 Timm50-002 28310914-28311939 processed_transcript
  ENSMUST00000151990 Timm50-006 28305824-28306664 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081946ENSMUST00000134263ENSMUST00000135220ENSMUST00000151990
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081946 33.011±4.89 22.937±5.31 11.841±1.57 24.553±10.92 22.251±11.67 19.134±3.43 22.784±3.54 32.762±10.31 23.530±15.78 11.900±2.00 15.129±5.53 24.236±6.84 20.407±2.92 10.849±0.46
ENSMUST00000134263 19.228±1.23 21.522±0.00 N/A 15.084±0.23 26.906±0.00 N/A 8.027±0.00 N/A N/A 8.794±0.37 N/A 18.972±9.65 25.319±5.30 3.211±0.00
ENSMUST00000135220 N/A 30.442±7.65 N/A N/A 22.154±0.20 N/A N/A N/A N/A N/A N/A N/A N/A 6.453±0.00
ENSMUST00000151990 N/A 34.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UV CIL_0006UV_0002 CGP 7:28293553-28312072

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001836 ISA release of cytochrome c from mitochondria
GO:0004721 ISA phosphoprotein phosphatase activity
GO:0004722 ISS protein serine/threonine phosphatase activity
GO:0004725 ISS protein tyrosine phosphatase activity
GO:0005134 ISA interleukin-2 receptor binding
GO:0005739 IDA mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005744 ISS mitochondrial inner membrane presequence translocase complex
GO:0006470 ISS protein dephosphorylation
GO:0007006 ISS mitochondrial membrane organization
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0016607 IEA nuclear speck
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0043021 IEA ribonucleoprotein complex binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031098 timm50 translocase of inner mitochondrial membrane 50 homolog (yeast) protein_coding Danio_rerio
ENSG00000105197 TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) protein_coding Homo_sapiens

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