C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003777 Taf6l-201 ENSMUSG00000003680 10090 - 19:8774529-8783999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003777
Transcript ID Adipose Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003777 2.959±0.00 3.364±0.63 1.713±0.00 3.993±0.40 3.341±1.29 3.482±0.00 0.770±0.00 6.245±0.77 5.600±2.14 4.860±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006352 IEA DNA-templated transcription, initiation
GO:0046982 IEA protein heterodimerization activity
GO:0051090 IEA regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294168 TAF6L-001 protein_coding Homo_sapiens 0 1925
ENST00000524976 TAF6L-002 retained_intron Homo_sapiens 0 1005
ENST00000525405 TAF6L-005 nonsense_mediated_decay Homo_sapiens 0 562
ENST00000529509 TAF6L-008 protein_coding Homo_sapiens 0 553
ENST00000532915 TAF6L-003 retained_intron Homo_sapiens 0 555
ENST00000533823 TAF6L-007 retained_intron Homo_sapiens 0 357

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