C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bromodomain containing 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003778 Brd8 10090 - 18:34598615-34624601 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003876 Brd8-001 34598615-34624601 protein_coding
  ENSMUST00000097626 Brd8-003 34599859-34624601 protein_coding
  ENSMUST00000115765 Brd8-008 34601175-34624601 protein_coding
  ENSMUST00000115766 Brd8-002 34598615-34624601 protein_coding
  ENSMUST00000127159 Brd8-007 34621914-34624601 retained_intron
  ENSMUST00000145431 Brd8-006 34611239-34624554 processed_transcript
  ENSMUST00000152612 Brd8-004 34599830-34624553 retained_intron
  ENSMUST00000153569 Brd8-005 34610262-34624601 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003876ENSMUST00000097626ENSMUST00000115765ENSMUST00000115766ENSMUST00000145431ENSMUST00000152612
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003876 N/A N/A 1.232±0.00 4.189±0.00 N/A 1.455±0.18 0.593±0.06 N/A 0.386±0.00 N/A 0.718±0.22 N/A N/A N/A
ENSMUST00000097626 1.998±0.40 4.883±1.00 7.791±0.99 10.902±4.51 4.778±0.00 3.200±0.87 1.327±0.19 1.982±0.23 5.990±6.97 2.270±0.02 2.246±0.41 7.187±5.56 12.740±3.73 6.406±1.09
ENSMUST00000115765 5.518±1.04 5.467±0.60 6.357±0.00 9.317±7.05 5.088±1.03 4.561±0.78 1.892±0.27 4.028±1.04 4.119±3.10 6.526±0.39 1.168±0.19 5.523±1.46 4.900±1.23 6.119±0.56
ENSMUST00000115766 N/A N/A N/A 2.153±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145431 N/A N/A N/A 30.670±0.00 N/A N/A N/A N/A N/A N/A N/A 47.034±0.00 48.134±17.34 73.917±0.00
ENSMUST00000152612 3.389±1.11 3.307±0.66 3.825±0.00 9.737±5.50 4.508±0.51 3.767±0.79 1.379±0.16 2.208±0.38 3.686±2.86 3.912±0.31 0.729±0.16 6.967±2.40 3.996±0.54 1.234±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P9 CIL_0005P9_0002 CGP 18:34598615-34633265

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000812 ISS Swr1 complex
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035267 ISS NuA4 histone acetyltransferase complex
GO:0040008 IEA regulation of growth
GO:0043967 ISS histone H4 acetylation
GO:0043968 ISS histone H2A acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025071 brd8 bromodomain containing 8 protein_coding Danio_rerio
ENSDARG00000055999 BRD8 (2 of 2) bromodomain containing 8 protein_coding Danio_rerio
ENSG00000112983 BRD8 bromodomain containing 8 protein_coding Homo_sapiens

Loading