C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115765 Brd8-008 ENSMUSG00000003778 10090 - 18:34601175-34624601 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115765
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115765 5.518±1.04 5.467±0.60 6.357±0.00 9.317±7.05 5.088±1.03 4.561±0.78 1.892±0.27 4.028±1.04 4.119±3.10 6.526±0.39 1.168±0.19 5.523±1.46 4.900±1.23 6.119±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P9 CIL_0005P9_0002 CGP 18:34598615-34633265

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230901 BRD8-002 protein_coding Homo_sapiens 0 3832
ENST00000254900 BRD8-001 protein_coding Homo_sapiens 0 2567
ENST00000402931 BRD8-006 protein_coding Homo_sapiens 0 2569
ENST00000411594 BRD8-201 protein_coding Homo_sapiens 0 2019
ENST00000418329 BRD8-004 protein_coding Homo_sapiens 0 2019
ENST00000425764 BRD8-012 processed_transcript Homo_sapiens 0 689
ENST00000428808 BRD8-010 nonsense_mediated_decay Homo_sapiens 0 850
ENST00000430331 BRD8-007 protein_coding Homo_sapiens 2.8026e-45 185
ENST00000432618 BRD8-011 nonsense_mediated_decay Homo_sapiens 0 732
ENST00000441656 BRD8-005 protein_coding Homo_sapiens 0 2019
ENST00000450756 BRD8-008 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000453824 BRD8-013 protein_coding Homo_sapiens 0 398
ENST00000454473 BRD8-003 protein_coding Homo_sapiens 0 2161
ENST00000460746 BRD8-016 retained_intron Homo_sapiens 0 484
ENST00000463620 BRD8-014 retained_intron Homo_sapiens 0 765
ENST00000471892 BRD8-020 retained_intron Homo_sapiens 0 342
ENST00000472478 BRD8-018 nonsense_mediated_decay Homo_sapiens 8e-38 161
ENST00000483805 BRD8-015 retained_intron Homo_sapiens 0 562
ENST00000489351 BRD8-017 retained_intron Homo_sapiens 0 508
ENST00000506167 BRD8-027 nonsense_mediated_decay Homo_sapiens 0 1050
ENST00000511898 BRD8-026 protein_coding Homo_sapiens 0 641
ENST00000512140 BRD8-022 nonsense_mediated_decay Homo_sapiens 0 2569
ENST00000515014 BRD8-028 processed_transcript Homo_sapiens 0 492
ENST00000515254 BRD8-025 retained_intron Homo_sapiens 0 606

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