C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor A, mitochondrial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003923 Tfam 10090 - 10:71225464-71238280 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000092430 Tfam-001 71225464-71238280 protein_coding
  ENSMUST00000105432 Tfam-002 71228457-71238280 protein_coding
  ENSMUST00000121685 Tfam-004 71228512-71237678 protein_coding
  ENSMUST00000145220 Tfam-003 71228446-71235321 processed_transcript
  ENSMUST00000152505 Tfam-005 71229116-71237042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092430ENSMUST00000105432ENSMUST00000145220ENSMUST00000152505
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092430 3.937±1.35 6.950±0.83 6.944±0.65 5.273±2.74 4.284±0.43 6.049±0.75 5.135±0.45 7.946±1.03 9.887±1.53 3.680±0.27 6.383±0.81 5.355±1.65 5.684±3.17 4.951±1.39
ENSMUST00000105432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.350±0.48 N/A N/A 27.737±3.22
ENSMUST00000145220 N/A N/A N/A 20.996±0.00 N/A N/A N/A N/A N/A N/A N/A 23.385±11.20 26.366±15.98 167.970±156.25
ENSMUST00000152505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.868±2.41 11.082±2.95 195.146±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 ISS chromatin binding
GO:0003700 TAS:ISS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0005739 IDA mitochondrion
GO:0006390 ISS transcription from mitochondrial promoter
GO:0006391 ISS transcription initiation from mitochondrial promoter
GO:0008301 ISS DNA binding, bending
GO:0031072 IEA heat shock protein binding
GO:0033108 IMP mitochondrial respiratory chain complex assembly
GO:0042645 ISS mitochondrial nucleoid
GO:0044822 IEA poly(A) RNA binding
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0070363 ISS mitochondrial light strand promoter sense binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063145 tfam transcription factor A, mitochondrial protein_coding Danio_rerio
ENSG00000108064 TFAM transcription factor A, mitochondrial protein_coding Homo_sapiens

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