C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor A, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105432 Tfam-002 ENSMUSG00000003923 10090 - 10:71228457-71238280 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENSMUST00000105432
Transcript ID Muscle Testis
ENSMUST00000105432 7.350±0.48 27.737±3.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 ISS chromatin binding
GO:0003700 TAS:ISS sequence-specific DNA binding transcription factor activity
GO:0005667 TAS transcription factor complex
GO:0005739 IDA mitochondrion
GO:0006390 ISS transcription from mitochondrial promoter
GO:0006391 ISS transcription initiation from mitochondrial promoter
GO:0008301 ISS DNA binding, bending
GO:0033108 IMP mitochondrial respiratory chain complex assembly
GO:0042645 ISS mitochondrial nucleoid
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0070363 ISS mitochondrial light strand promoter sense binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373899 TFAM-003 processed_transcript Homo_sapiens 0 219
ENST00000395377 TFAM-001 protein_coding Homo_sapiens 0 235
ENST00000487519 TFAM-002 protein_coding Homo_sapiens 0 300

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