C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BH3 interacting domain death agonist
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004446 Bid 10090 - 6:120891930-120916853 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004560 Bid-001 120892854-120916853 protein_coding
  ENSMUST00000125915 Bid-002 120906998-120916803 processed_transcript
  ENSMUST00000145948 Bid-003 120900222-120916798 protein_coding
  ENSMUST00000160684 Bid-004 120891930-120916836 nonsense_mediated_decay
  ENSMUST00000161594 Bid-005 120895618-120897568 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000004560ENSMUST00000160684
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000004560 N/A N/A 3.398±0.00 N/A N/A N/A 18.191±2.98 4.968±0.12 N/A N/A 5.941±0.19 N/A
ENSMUST00000160684 6.747±0.59 5.059±0.00 5.349±0.08 6.429±2.47 7.142±0.75 5.311±0.57 12.519±1.29 8.045±3.97 3.263±0.31 6.602±1.19 4.436±1.48 2.167±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000241 CIL_000241_0002 CGP 6:120795245-120892842
CIL_000242 CIL_000242_0002 CGP 6:120836230-120916853
CIL_0002Z7 CIL_0002Z7_0002 CGP 6:120891930-121003153

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001836 IMP release of cytochrome c from mitochondria
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0006626 IMP protein targeting to mitochondrion
GO:0006919 IMP activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007420 IEA brain development
GO:0008637 IDA apoptotic mitochondrial changes
GO:0016020 IDA membrane
GO:0031625 IPI ubiquitin protein ligase binding
GO:0032355 IEA response to estradiol
GO:0032459 IDA regulation of protein oligomerization
GO:0032461 IEA positive regulation of protein oligomerization
GO:0032464 IDA positive regulation of protein homooligomerization
GO:0032592 IDA integral component of mitochondrial membrane
GO:0034349 IEA glial cell apoptotic process
GO:0042127 IMP regulation of cell proliferation
GO:0042770 TAS signal transduction in response to DNA damage
GO:0051260 IDA protein homooligomerization
GO:0070062 IEA extracellular vesicular exosome
GO:0090150 IEA establishment of protein localization to membrane
GO:0090200 IGI positive regulation of release of cytochrome c from mitochondria
GO:0097191 IMP extrinsic apoptotic signaling pathway
GO:0097284 IGI hepatocyte apoptotic process
GO:0097345 IGI mitochondrial outer membrane permeabilization
GO:1902108 IGI regulation of mitochondrial membrane permeability involved in apoptotic process
GO:2000045 IMP regulation of G1/S transition of mitotic cell cycle
GO:2001238 IEA positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000015475 BID BH3 interacting domain death agonist protein_coding Homo_sapiens

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