C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: methyltransferase like 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004561 Mettl17 10090 + 14:51884842-51893039 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047899 Mettl17-001 51884842-51891868 protein_coding
  ENSMUST00000077846 Mettl17-015 51887179-51889013 retained_intron
  ENSMUST00000163603 Mettl17-003 51884889-51891793 retained_intron
  ENSMUST00000164252 Mettl17-008 51884889-51891793 nonsense_mediated_decay
  ENSMUST00000164801 Mettl17-016 51884938-51888924 retained_intron
  ENSMUST00000164902 Mettl17-007 51884946-51891735 protein_coding
  ENSMUST00000165100 Mettl17-002 51884889-51891793 nonsense_mediated_decay
  ENSMUST00000165150 Mettl17-009 51884952-51887272 retained_intron
  ENSMUST00000165568 Mettl17-014 51885402-51890728 protein_coding
  ENSMUST00000166408 Mettl17-006 51884935-51893039 retained_intron
  ENSMUST00000167984 Mettl17-013 51885141-51885420 protein_coding
  ENSMUST00000168217 Mettl17-012 51884878-51889584 nonsense_mediated_decay
  ENSMUST00000168409 Mettl17-011 51884954-51885662 retained_intron
  ENSMUST00000168413 Mettl17-004 51884876-51891860 retained_intron
  ENSMUST00000169019 Mettl17-005 51884912-51889302 retained_intron
  ENSMUST00000170887 Mettl17-010 51884918-51885658 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047899ENSMUST00000164252ENSMUST00000164801ENSMUST00000164902ENSMUST00000165100ENSMUST00000166408ENSMUST00000168413ENSMUST00000170887
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047899 4.247±0.92 N/A 5.543±0.42 6.745±0.58 5.489±1.76 N/A 5.667±1.00 5.218±1.74 4.764±0.89 3.183±0.19 3.149±1.00 6.439±2.44 4.215±1.74 3.794±0.02
ENSMUST00000164252 N/A 5.494±0.07 N/A N/A N/A N/A N/A N/A 2.494±0.00 2.860±0.00 N/A N/A N/A N/A
ENSMUST00000164801 12.441±0.00 14.030±1.97 N/A N/A 13.998±0.00 12.007±0.00 N/A N/A N/A N/A N/A 9.317±2.08 N/A N/A
ENSMUST00000164902 N/A N/A N/A N/A 2.354±0.00 N/A N/A 2.351±0.00 N/A 3.418±0.00 N/A N/A N/A 1.626±0.00
ENSMUST00000165100 4.816±1.17 10.265±3.07 5.114±0.00 6.992±1.99 8.217±3.00 12.586±2.26 1.974±0.35 4.421±1.89 3.339±0.96 6.131±1.96 2.044±0.00 10.765±3.15 2.437±0.17 2.218±0.04
ENSMUST00000166408 2.834±0.97 7.003±1.01 N/A 5.998±1.33 4.405±1.89 4.155±0.82 1.223±0.37 2.049±1.02 1.748±0.43 3.997±0.91 0.921±0.25 3.627±1.14 0.966±0.44 0.814±0.51
ENSMUST00000168413 N/A N/A 3.931±0.00 5.089±0.00 N/A N/A N/A 1.961±0.00 N/A N/A 0.980±0.29 2.805±0.05 2.295±0.53 2.283±0.00
ENSMUST00000170887 N/A 23.710±8.15 N/A N/A 18.052±0.00 N/A N/A N/A N/A N/A N/A 13.589±0.00 N/A 3.531±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EJ CIL_0004EJ_0002 CGP 14:51853699-51893039
CIL_0004F1 CIL_0004F1_0002 CGP 14:51884842-51896745

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005507 IEA copper ion binding
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079134 mettl17 methyltransferase like 17 protein_coding Danio_rerio
ENSG00000165792 METTL17 methyltransferase like 17 protein_coding Homo_sapiens

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