C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: methyltransferase like 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047899 Mettl17-001 ENSMUSG00000004561 10090 + 14:51884842-51891868 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047899
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047899 4.247±0.92 5.543±0.42 6.745±0.58 5.489±1.76 5.667±1.00 5.218±1.74 4.764±0.89 3.183±0.19 3.149±1.00 6.439±2.44 4.215±1.74 3.794±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EJ CIL_0004EJ_0002 CGP 14:51853699-51893039
CIL_0004F1 CIL_0004F1_0002 CGP 14:51884842-51896745

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005507 IEA copper ion binding
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339374 METTL17-001 protein_coding Homo_sapiens 0 1275
ENST00000382985 METTL17-002 protein_coding Homo_sapiens 0 1122
ENST00000553389 METTL17-024 retained_intron Homo_sapiens 0 547
ENST00000554849 METTL17-025 retained_intron Homo_sapiens 0 392
ENST00000555533 METTL17-007 nonsense_mediated_decay Homo_sapiens 0 907
ENST00000555640 METTL17-006 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000555670 METTL17-019 protein_coding Homo_sapiens 0 560
ENST00000555902 METTL17-020 retained_intron Homo_sapiens 0 569
ENST00000556670 METTL17-005 protein_coding Homo_sapiens 0 1120
ENST00000556733 METTL17-027 protein_coding Homo_sapiens 0 291
ENST00000557550 METTL17-008 nonsense_mediated_decay Homo_sapiens 0 1046

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