C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: methyltransferase like 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165100 Mettl17-002 ENSMUSG00000004561 10090 + 14:51884889-51891793 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165100
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165100 4.816±1.17 10.265±3.07 5.114±0.00 6.992±1.99 8.217±3.00 12.586±2.26 1.974±0.35 4.421±1.89 3.339±0.96 6.131±1.96 2.044±0.00 10.765±3.15 2.437±0.17 2.218±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EJ CIL_0004EJ_0002 CGP 14:51853699-51893039
CIL_0004F1 CIL_0004F1_0002 CGP 14:51884842-51896745

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005507 IEA copper ion binding
GO:0005739 IDA mitochondrion
GO:0006412 IEA translation
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339374 METTL17-001 protein_coding Homo_sapiens 0 590
ENST00000382985 METTL17-002 protein_coding Homo_sapiens 0 490
ENST00000553389 METTL17-024 retained_intron Homo_sapiens 0 508
ENST00000554849 METTL17-025 retained_intron Homo_sapiens 0 368
ENST00000555533 METTL17-007 nonsense_mediated_decay Homo_sapiens 0 490
ENST00000555640 METTL17-006 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000556670 METTL17-005 protein_coding Homo_sapiens 0 488
ENST00000556733 METTL17-027 protein_coding Homo_sapiens 0 291
ENST00000557550 METTL17-008 nonsense_mediated_decay Homo_sapiens 0 590

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