C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitogen-activated protein kinase 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004864 Mapk13 10090 + 17:28769307-28778698 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004986 Mapk13-001 28769307-28778698 protein_coding
  ENSMUST00000124099 Mapk13-003 28769336-28778219 retained_intron
  ENSMUST00000129096 Mapk13-002 28769349-28778546 nonsense_mediated_decay
  ENSMUST00000133786 Mapk13-004 28769372-28777562 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004986ENSMUST00000124099ENSMUST00000129096ENSMUST00000133786
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004986 2.865±2.71 89.520±15.67 14.881±3.07 0.366±0.08 5.319±1.20 109.500±6.02 0.232±0.09 5.580±0.64 2.545±4.13 6.439±1.37 0.125±0.04 6.584±1.55 18.298±6.70 1.037±0.21
ENSMUST00000124099 1.252±0.86 33.465±6.24 5.891±0.00 N/A 1.944±0.36 44.565±9.68 0.101±0.00 N/A 0.137±0.00 2.111±0.82 0.065±0.00 1.178±0.15 5.545±1.60 0.249±0.13
ENSMUST00000129096 N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A N/A 0.080±0.01 N/A 6.423±1.85 N/A
ENSMUST00000133786 0.104±0.02 N/A N/A 0.374±0.00 N/A N/A 0.106±0.06 N/A N/A N/A 0.099±0.05 4.928±0.00 15.256±4.72 0.440±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002O5 CIL_0002O5_0002 CGP 17:28691342-28778698
CIL_0002O6 CIL_0002O6_0002 CGP 17:28769307-28838546

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000165 IEA MAPK cascade
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004707 ISS MAP kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 IEA protein phosphorylation
GO:0006950 IEA response to stress
GO:0006970 IEA response to osmotic stress
GO:0007049 IEA cell cycle
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0032755 IEA positive regulation of interleukin-6 production
GO:0035556 ISS intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058470 mapk13 mitogen-activated protein kinase 13 protein_coding Danio_rerio
ENSG00000156711 MAPK13 mitogen-activated protein kinase 13 protein_coding Homo_sapiens

Loading