C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002O6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156711-ENSG00000096070 CGP 9606 6:36127809-36232790
GeneTranscriptPositionBiotype
ENSG00000096070 (BRPF3)
bromodomain and PHD finger containing, 3 		ENST00000339717 (BRPF3-003) 36196966-36232590 protein_coding
ENST00000357641 (BRPF3-001) 36196744-36232790 protein_coding
ENST00000441123 (BRPF3-004) 36200406-36232790 nonsense_mediated_decay
ENST00000441730 (BRPF3-005) 36211448-36232787 nonsense_mediated_decay
ENST00000446974 (BRPF3-006) 36197396-36200608 protein_coding
ENST00000449261 (BRPF3-009) 36196966-36232590 nonsense_mediated_decay
ENST00000454960 (BRPF3-007) 36197452-36200709 protein_coding
ENST00000527657 (BRPF3-012) 36204414-36207348 protein_coding
ENST00000532330 (BRPF3-010) 36200297-36231317 nonsense_mediated_decay
ENST00000532538 (BRPF3-013) 36211201-36214066 retained_intron
ENST00000534400 (BRPF3-011) 36200297-36231317 protein_coding
ENST00000534694 (BRPF3-008) 36196966-36232590 protein_coding
ENSG00000156711 (MAPK13)
mitogen-activated protein kinase 13 		ENST00000211287 (MAPK13-001) 36130321-36140065 protein_coding
ENST00000373759 (MAPK13-004) 36130663-36139207 protein_coding
ENST00000373766 (MAPK13-201) 36130484-36144524 protein_coding
ENST00000476951 (MAPK13-005) 36127809-36135832 processed_transcript
ENST00000490334 (MAPK13-002) 36130869-36136515 processed_transcript
ENSG00000246982 (RP1-179N16.6)
 ENST00000499560 (RP1-179N16.6-001) 36158068-36197205 antisense
ENST00000526611 (RP1-179N16.6-002) 36146698-36197203 antisense
CIL_0002O6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004864-ENSMUSG00000063952 CGP 10090 17:28769307-28838546
GeneTranscriptPositionBiotype
ENSMUSG00000004864 (Mapk13)
mitogen-activated protein kinase 13 		ENSMUST00000004986 (Mapk13-001) 28769307-28778698 protein_coding
ENSMUST00000124099 (Mapk13-003) 28769336-28778219 retained_intron
ENSMUST00000129096 (Mapk13-002) 28769349-28778546 nonsense_mediated_decay
ENSMUST00000133786 (Mapk13-004) 28769372-28777562 retained_intron
ENSMUSG00000063952 (Brpf3)
bromodomain and PHD finger containing, 3 		ENSMUST00000004985 (Brpf3-001) 28801090-28838546 protein_coding
ENSMUST00000123942 (Brpf3-005) 28814587-28817798 processed_transcript
ENSMUST00000126868 (Brpf3-006) 28809659-28817174 processed_transcript
ENSMUST00000127007 (Brpf3-007) 28828082-28836791 processed_transcript
ENSMUST00000136233 (Brpf3-008) 28801784-28806308 processed_transcript
ENSMUST00000140587 (Brpf3-009) 28823594-28836736 processed_transcript
ENSMUST00000140973 (Brpf3-004) 28823674-28838541 processed_transcript
ENSMUST00000144022 (Brpf3-003) 28822639-28836698 processed_transcript
ENSMUST00000148149 (Brpf3-010) 28814434-28817560 retained_intron
ENSMUST00000156029 (Brpf3-002) 28810551-28838493 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002O6_0001ENSG00000096070ENST00000339717ENST00000357641ENST00000441123ENST00000441730ENST00000446974ENST00000449261ENST00000454960ENST00000527657ENST00000532330ENST00000532538ENST00000534400ENST00000534694ENSG00000156711ENST00000211287ENST00000373759ENST00000373766ENST00000476951ENST00000490334ENSG00000246982ENST00000499560ENST00000526611CIL_0002O6_0002ENSMUSG00000004864ENSMUST00000004986ENSMUST00000124099ENSMUST00000129096ENSMUST00000133786ENSMUSG00000063952ENSMUST00000004985ENSMUST00000123942ENSMUST00000126868ENSMUST00000127007ENSMUST00000136233ENSMUST00000140587ENSMUST00000140973ENSMUST00000144022ENSMUST00000148149ENSMUST00000156029
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002O6_0001ENSG00000096070ENST00000339717ENST00000357641ENST00000441123ENST00000441730ENST00000449261ENST00000527657ENST00000534400ENST00000534694ENSG00000156711ENST00000211287ENST00000373759ENST00000373766ENSG00000246982ENST00000499560ENST00000526611CIL_0002O6_0002ENSMUSG00000004864ENSMUST00000004986ENSMUST00000124099ENSMUST00000129096ENSMUST00000133786ENSMUSG00000063952ENSMUST00000004985ENSMUST00000140587ENSMUST00000140973ENSMUST00000156029
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000096070 ENST00000339717 2.316±0.00 2.385±0.00 0.841±0.00 3.329±0.00 1.168±0.00 1.779±0.00 0.775±0.42 1.809±0.48 1.292±0.00 N/A 4.280±0.00 2.223±0.00 1.470±0.00 5.827±0.00
ENST00000357641 1.937±0.00 1.171±0.00 2.078±0.00 1.581±0.00 0.590±0.09 2.333±1.55 2.941±0.00 3.039±0.00 0.843±0.00 2.506±0.00 6.004±0.00 4.895±4.42 2.552±0.10 6.316±1.26
ENST00000441123 N/A N/A N/A N/A N/A N/A N/A 0.352±0.00 N/A N/A N/A N/A 0.785±0.00 N/A
ENST00000441730 1.616±0.00 3.230±0.00 N/A 2.182±1.17 1.033±0.00 2.852±0.00 1.607±0.00 3.744±0.00 2.081±0.00 1.917±0.00 4.360±0.00 5.139±2.25 N/A 11.158±3.58
ENST00000446974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449261 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.704±0.00 2.205±0.00 N/A N/A N/A
ENST00000454960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.324±0.00 N/A N/A
ENST00000532330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534400 N/A N/A N/A N/A 1.047±0.32 0.745±0.00 N/A 0.587±0.00 0.482±0.00 0.403±0.00 N/A N/A N/A N/A
ENST00000534694 N/A N/A 1.473±0.00 N/A N/A N/A 0.897±0.00 N/A 0.858±0.10 N/A 0.718±0.00 N/A N/A N/A
ENSG00000156711 ENST00000211287 2.640±0.00 7.857±0.00 N/A N/A 1.907±0.03 1.807±1.00 0.241±0.00 3.387±3.33 0.445±0.13 4.608±3.90 N/A 21.464±25.65 11.300±1.35 33.233±11.30
ENST00000373759 N/A N/A N/A N/A N/A N/A N/A N/A 0.419±0.00 N/A N/A 50.051±0.00 N/A 46.944±0.00
ENST00000373766 1.115±0.00 4.167±0.00 N/A 0.411±0.00 0.684±0.00 1.423±0.00 0.079±0.06 0.974±0.97 0.400±0.00 1.634±0.00 0.035±0.03 1.850±0.00 1.231±0.35 4.787±1.45
ENST00000476951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000246982 ENST00000499560 N/A 0.209±0.00 0.163±0.00 0.288±0.13 0.059±0.03 0.119±0.07 N/A 0.344±0.17 0.094±0.00 0.272±0.17 0.118±0.00 0.328±0.22 0.058±0.00 3.861±2.12
ENST00000526611 0.131±0.00 1.767±0.00 N/A 0.386±0.00 0.255±0.00 0.657±0.00 0.334±0.12 1.200±0.00 0.494±0.00 0.260±0.00 0.274±0.00 0.431±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004864 ENSMUST00000004986 2.865±2.71 89.520±15.67 14.881±3.07 0.366±0.08 5.319±1.20 109.500±6.02 0.232±0.09 5.580±0.64 2.545±4.13 6.439±1.37 0.125±0.04 6.584±1.55 18.298±6.70 1.037±0.21
ENSMUST00000124099 1.252±0.86 33.465±6.24 5.891±0.00 N/A 1.944±0.36 44.565±9.68 0.101±0.00 N/A 0.137±0.00 2.111±0.82 0.065±0.00 1.178±0.15 5.545±1.60 0.249±0.13
ENSMUST00000129096 N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A N/A 0.080±0.01 N/A 6.423±1.85 N/A
ENSMUST00000133786 0.104±0.02 N/A N/A 0.374±0.00 N/A N/A 0.106±0.06 N/A N/A N/A 0.099±0.05 4.928±0.00 15.256±4.72 0.440±0.24
ENSMUSG00000063952 ENSMUST00000004985 8.106±3.03 10.742±2.90 5.395±0.64 5.438±1.05 4.444±0.65 12.172±1.23 1.492±0.52 5.166±0.42 7.471±5.19 4.867±1.75 1.539±0.30 9.182±2.10 15.954±5.95 10.619±2.84
ENSMUST00000123942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.376±0.00
ENSMUST00000140973 7.888±0.00 11.161±1.93 4.115±0.23 3.749±0.40 5.303±1.08 20.237±6.63 1.578±0.00 3.792±0.23 32.338±17.28 3.316±0.77 N/A 5.528±1.84 8.370±1.66 17.807±2.31
ENSMUST00000144022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156029 N/A N/A N/A 1.344±0.00 N/A 4.078±0.69 N/A N/A N/A N/A N/A 2.854±0.17 4.262±1.13 0.969±0.00

Loading