C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitogen-activated protein kinase 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004986 Mapk13-001 ENSMUSG00000004864 10090 + 17:28769307-28778698 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004986
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004986 2.865±2.71 89.520±15.67 14.881±3.07 0.366±0.08 5.319±1.20 109.500±6.02 0.232±0.09 5.580±0.64 2.545±4.13 6.439±1.37 0.125±0.04 6.584±1.55 18.298±6.70 1.037±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002O5 CIL_0002O5_0002 CGP 17:28691342-28778698
CIL_0002O6 CIL_0002O6_0002 CGP 17:28769307-28838546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000165 IEA MAPK cascade
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004707 ISS MAP kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006950 IEA response to stress
GO:0006970 IEA response to osmotic stress
GO:0007049 IEA cell cycle
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0032755 IEA positive regulation of interleukin-6 production
GO:0035556 ISS intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000211287 MAPK13-001 protein_coding Homo_sapiens 0 1325
ENST00000215659 MAPK12-001 protein_coding Homo_sapiens 0 416
ENST00000229794 MAPK14-002 protein_coding Homo_sapiens 0 196
ENST00000229795 MAPK14-001 protein_coding Homo_sapiens 0 196
ENST00000310795 MAPK14-004 protein_coding Homo_sapiens 0 196
ENST00000373759 MAPK13-004 protein_coding Homo_sapiens 0 673
ENST00000373766 MAPK13-201 protein_coding Homo_sapiens 0 789
ENST00000395780 MAPK12-004 protein_coding Homo_sapiens 0 261
ENST00000467891 MAPK12-002 retained_intron Homo_sapiens 0 257
ENST00000468133 MAPK14-003 protein_coding Homo_sapiens 0 196
ENST00000472333 MAPK14-007 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000474429 MAPK14-008 nonsense_mediated_decay Homo_sapiens 8.00141e-43 178
ENST00000476951 MAPK13-005 processed_transcript Homo_sapiens 0 448
ENST00000482969 MAPK12-005 retained_intron Homo_sapiens 0 255
ENST00000488504 MAPK12-003 retained_intron Homo_sapiens 0 257
ENST00000490334 MAPK13-002 processed_transcript Homo_sapiens 0 462
ENST00000496250 MAPK14-005 retained_intron Homo_sapiens 0 196
ENST00000496942 MAPK12-007 retained_intron Homo_sapiens 6e-39 167
ENST00000497036 MAPK12-006 processed_transcript Homo_sapiens 0 309
ENST00000622558 MAPK12-201 protein_coding Homo_sapiens 0 261

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