C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005357 Slc1a6 10090 + 10:78780496-78814825 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005490 Slc1a6-201 78780496-78814825 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005490 0.248±0.17 0.203±0.14 0.349±0.00 5.512±1.03 0.078±0.04 0.226±0.07 0.047±0.03 0.075±0.03 0.096±0.07 0.189±0.05 0.040±0.02 2.184±0.92 0.410±0.18 0.225±0.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005313 IMP L-glutamate transmembrane transporter activity
GO:0005794 IDA Golgi apparatus
GO:0015813 IMP L-glutamate transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0017153 IEA sodium:dicarboxylate symporter activity
GO:0042391 IMP regulation of membrane potential
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010096 slc1a6 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 protein_coding Danio_rerio
ENSG00000105143 SLC1A6 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 protein_coding Homo_sapiens

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