C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD247 antigen
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005763 Cd247 10090 + 1:165788681-165877277 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005907 Cd247-004 165788689-165862066 protein_coding
  ENSMUST00000027849 Cd247-003 165788723-165867436 protein_coding
  ENSMUST00000086002 Cd247-005 165788765-165869094 nonsense_mediated_decay
  ENSMUST00000159070 Cd247-007 165858216-165861555 retained_intron
  ENSMUST00000161559 Cd247-002 165788765-165870249 protein_coding
  ENSMUST00000161971 Cd247-001 165788681-165871153 protein_coding
  ENSMUST00000162411 Cd247-006 165864655-165877277 processed_transcript
  ENSMUST00000178336 Cd247-201 165788681-165871153 protein_coding
  ENSMUST00000187313 Cd247-202 165788681-165871153 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLungMuscleTestisENSMUST00000005907ENSMUST00000162411
Transcript ID Adipose Breast Heart Kidney Lung Muscle Testis
ENSMUST00000005907 4.588±0.82 23.536±5.84 1.469±0.00 3.910±0.36 5.962±1.09 1.801±0.38 N/A
ENSMUST00000162411 N/A N/A N/A N/A N/A N/A 8.719±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UH CIL_0008UH_0002 VISTA 1:165634234-166236307

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0005515 IPI protein binding
GO:0005737 ISO cytoplasm
GO:0005886 ISO plasma membrane
GO:0016021 IEA integral component of membrane
GO:0042101 IEA T cell receptor complex
GO:0042105 IDA alpha-beta T cell receptor complex
GO:0042802 IEA identical protein binding
GO:0050852 IDA T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077240 cd247l CD247 antigen like protein_coding Danio_rerio
ENSG00000198821 CD247 CD247 molecule protein_coding Homo_sapiens

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