C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008UH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1331 VISTA 9606 1:167027717-167629809
GeneTranscriptPositionBiotype
ENSG00000143162 (CREG1)
cellular repressor of E1A-stimulated genes 1 		ENST00000370509 (CREG1-001) 167541013-167553767 protein_coding
ENST00000466652 (CREG1-002) 167529677-167546180 processed_transcript
ENSG00000143167 (GPA33)
glycoprotein A33 (transmembrane) 		ENST00000367868 (GPA33-001) 167052836-167090631 protein_coding
ENST00000527955 (GPA33-002) 167052836-167078719 processed_transcript
ENST00000534512 (GPA33-003) 167063690-167090326 nonsense_mediated_decay
ENSG00000198821 (CD247)
CD247 molecule 		ENST00000362089 (CD247-002) 167430640-167518538 protein_coding
ENST00000392122 (CD247-001) 167430640-167518610 protein_coding
ENST00000470379 (CD247-006) 167431173-167439640 processed_transcript
ENST00000476733 (CD247-005) 167431161-167439621 processed_transcript
ENST00000479979 (CD247-004) 167439873-167518610 processed_transcript
ENST00000483825 (CD247-003) 167430640-167518529 processed_transcript
ENST00000485089 (CD247-007) 167430640-167434066 processed_transcript
ENSG00000198842 (DUSP27)
dual specificity phosphatase 27 (putative) 		ENST00000271385 (DUSP27-201) 167094340-167128608 protein_coding
ENST00000361200 (DUSP27-001) 167094045-167129129 protein_coding
ENST00000443333 (DUSP27-202) 167094850-167129165 protein_coding
ENST00000485151 (DUSP27-002) 167125919-167129125 processed_transcript
ENSG00000213068 (RP11-277B15.1)
 ENST00000450126 (RP11-277B15.1-001) 167162423-167162837 processed_pseudogene
ENSG00000227776 (AKR1D1P1)
aldo-keto reductase family 1, member D1 pseudogene 1 		ENST00000457236 (AKR1D1P1-001) 167519536-167520586 processed_pseudogene
ENSG00000227907 (RP11-102C16.3)
 ENST00000417644 (RP11-102C16.3-001) 167052551-167058542 antisense
ENSG00000231029 (RP3-455J7.3)
 ENST00000422817 (RP3-455J7.3-001) 167591392-167591846 processed_pseudogene
ENSG00000231605 (LINC01363)
long intergenic non-protein coding RNA 1363 		ENST00000426709 (LINC01363-001) 167175917-167195789 antisense
ENST00000428030 (LINC01363-002) 167176074-167195480 antisense
ENST00000446687 (LINC01363-003) 167176347-167195792 antisense
ENST00000457941 (LINC01363-004) 167176221-167195748 antisense
ENSG00000233411 (RP11-104L21.2)
 ENST00000417969 (RP11-104L21.2-001) 167457383-167458661 sense_intronic
ENSG00000272033 (RP11-52A20.2)
 ENST00000607611 (RP11-52A20.2-001) 167379108-167381000 sense_intronic
ENSG00000272205 (RP11-277B15.3)
 ENST00000606967 (RP11-277B15.3-001) 167219831-167220512 lincRNA
ENSG00000273160 (RP11-104L21.3)
 ENST00000610044 (RP11-104L21.3-001) 167457742-167459891 lincRNA
CIL_0008UH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1331 VISTA 10090 1:165634234-166236307
GeneTranscriptPositionBiotype
ENSMUSG00000000544 (Gpa33)
glycoprotein A33 (transmembrane) 		ENSMUST00000027847 (Gpa33-002) 166130417-166154136 processed_transcript
ENSMUST00000060833 (Gpa33-001) 166130238-166166510 protein_coding
ENSMUST00000166159 (Gpa33-004) 166130340-166157529 protein_coding
ENSMUST00000166860 (Gpa33-201) 166130467-166166509 protein_coding
ENSMUSG00000005763 (Cd247)
CD247 antigen 		ENSMUST00000005907 (Cd247-004) 165788689-165862066 protein_coding
ENSMUST00000027849 (Cd247-003) 165788723-165867436 protein_coding
ENSMUST00000086002 (Cd247-005) 165788765-165869094 nonsense_mediated_decay
ENSMUST00000159070 (Cd247-007) 165858216-165861555 retained_intron
ENSMUST00000161559 (Cd247-002) 165788765-165870249 protein_coding
ENSMUST00000161971 (Cd247-001) 165788681-165871153 protein_coding
ENSMUST00000162411 (Cd247-006) 165864655-165877277 processed_transcript
ENSMUST00000178336 (Cd247-201) 165788681-165871153 protein_coding
ENSMUST00000187313 (Cd247-202) 165788681-165871153 protein_coding
ENSMUSG00000026564 (Dusp27)
dual specificity phosphatase 27 (putative) 		ENSMUST00000085992 (Dusp27-201) 166098153-166127898 protein_coding
ENSMUSG00000026566 (Mpzl1)
myelin protein zero-like 1 		ENSMUST00000068705 (Mpzl1-201) 165592181-165634541 protein_coding
ENSMUST00000111435 (Mpzl1-202) 165592181-165634541 protein_coding
ENSMUSG00000040629 (Mael)
maelstrom homolog (Drosophila) 		ENSMUST00000038782 (Mael-001) 166201385-166238744 protein_coding
ENSMUSG00000040713 (Creg1)
cellular repressor of E1A-stimulated genes 1 		ENSMUST00000040298 (Creg1-003) 165769476-165773918 protein_coding
ENSMUST00000111432 (Creg1-001) 165763746-165775308 protein_coding
ENSMUST00000140769 (Creg1-002) 165763746-165775308 nonsense_mediated_decay
ENSMUSG00000040723 (Rcsd1)
RCSD domain containing 1 		ENSMUST00000040357 (Rcsd1-201) 165648945-165708094 protein_coding
ENSMUST00000097474 (Rcsd1-202) 165648945-165708094 protein_coding
ENSMUSG00000088618 (Gm24808)
predicted gene, 24808 		ENSMUST00000157993 (Gm24808-201) 165785834-165785951 rRNA
ENSMUSG00000094394 (Gm23402)
predicted gene, 23402 		ENSMUST00000178130 (Gm23402-201) 165809636-165809742 snRNA
ENSMUSG00000097196 (Gm26665)
predicted gene, 26665 		ENSMUST00000181378 (Gm26665-001) 166002960-166038256 lincRNA
ENSMUSG00000099008 (Gm17976)
predicted gene, 17976 		ENSMUST00000184037 (Gm17976-001) 165941618-165943526 processed_pseudogene
ENSMUSG00000099515 (POU2F1)
 ENSMUST00000111427 (POU2F1-201) 165865154-165934948 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UH_0001ENSG00000143162ENST00000370509ENST00000466652ENSG00000143167ENST00000367868ENST00000527955ENST00000534512ENSG00000198821ENST00000362089ENST00000392122ENST00000470379ENST00000476733ENST00000479979ENST00000483825ENST00000485089ENSG00000198842ENST00000271385ENST00000361200ENST00000443333ENST00000485151ENSG00000213068ENST00000450126ENSG00000227776ENST00000457236ENSG00000227907ENST00000417644ENSG00000231029ENST00000422817ENSG00000231605ENST00000426709ENST00000428030ENST00000446687ENST00000457941ENSG00000233411ENST00000417969ENSG00000272033ENST00000607611ENSG00000272205ENST00000606967ENSG00000273160ENST00000610044CIL_0008UH_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UH_0001ENSG00000143162ENST00000370509ENSG00000143167ENST00000367868ENST00000527955ENST00000534512ENSG00000198821ENST00000362089ENST00000392122ENST00000470379ENST00000476733ENST00000479979ENST00000483825ENST00000485089ENSG00000198842ENST00000271385ENST00000361200ENST00000443333ENST00000485151ENSG00000213068ENST00000450126ENSG00000227776ENST00000457236ENSG00000227907ENST00000417644ENSG00000231029ENST00000422817ENSG00000231605ENST00000426709ENST00000428030ENST00000446687ENSG00000233411ENST00000417969ENSG00000272033ENST00000607611ENSG00000272205ENST00000606967ENSG00000273160ENST00000610044CIL_0008UH_0002ENSMUSG00000000544ENSMUST00000027847ENSMUST00000060833ENSMUST00000166159ENSMUST00000166860ENSMUSG00000005763ENSMUST00000005907ENSMUST00000162411ENSMUSG00000026564ENSMUST00000085992ENSMUSG00000026566ENSMUST00000068705ENSMUST00000111435ENSMUSG00000040629ENSMUST00000038782ENSMUSG00000040713ENSMUST00000040298ENSMUST00000111432ENSMUSG00000040723ENSMUST00000040357ENSMUST00000097474ENSMUSG00000088618ENSMUST00000157993ENSMUSG00000094394ENSMUST00000178130ENSMUSG00000097196ENSMUST00000181378ENSMUSG00000099008ENSMUST00000184037ENSMUSG00000099515ENSMUST00000111427
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143162 ENST00000370509 44.265±0.00 26.939±0.00 11.516±0.00 15.044±1.65 37.054±12.90 24.626±9.89 17.162±10.97 46.584±5.55 41.436±18.78 31.155±12.62 17.306±9.91 45.840±10.77 50.024±5.58 25.991±6.38
ENST00000466652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000143167 ENST00000367868 0.050±0.00 0.201±0.00 N/A N/A 5.484±0.00 14.220±7.95 N/A N/A N/A 0.279±0.21 N/A 2.507±2.70 0.079±0.00 N/A
ENST00000527955 N/A N/A N/A 0.008±0.00 0.015±0.00 7.463±2.09 0.332±0.00 N/A N/A 0.541±0.00 N/A 1.120±0.00 0.164±0.06 0.613±0.31
ENST00000534512 N/A 0.273±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198821 ENST00000362089 0.518±0.00 5.938±0.00 N/A 0.162±0.00 0.848±0.27 N/A 0.298±0.00 0.227±0.00 N/A 6.491±5.34 N/A 0.763±0.29 0.624±0.00 0.699±0.00
ENST00000392122 N/A 3.082±0.00 N/A 0.404±0.00 N/A 0.263±0.16 N/A N/A 0.676±0.00 N/A N/A 0.785±0.40 0.570±0.17 0.614±0.00
ENST00000470379 0.215±0.00 3.367±0.00 N/A 0.117±0.00 N/A 1.162±0.00 N/A N/A 0.258±0.00 2.153±0.00 N/A N/A 1.331±0.00 N/A
ENST00000476733 0.393±0.00 N/A N/A N/A N/A N/A 0.178±0.00 0.121±0.00 0.883±0.00 N/A 0.543±0.00 0.743±0.00 1.011±0.00 0.224±0.00
ENST00000479979 N/A N/A 0.056±0.00 N/A 0.306±0.00 0.835±0.00 N/A 0.439±0.00 N/A 0.863±0.00 N/A N/A N/A N/A
ENST00000483825 N/A 1.596±0.00 N/A 0.035±0.00 N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A N/A 0.062±0.00
ENST00000485089 N/A 8.818±0.00 N/A N/A 0.491±0.00 0.638±0.00 N/A 0.441±0.00 N/A N/A 0.555±0.00 N/A N/A 0.359±0.00
ENSG00000198842 ENST00000271385 0.038±0.00 N/A N/A 0.175±0.00 0.053±0.00 N/A N/A 0.022±0.01 N/A 0.066±0.00 N/A 0.033±0.00 N/A N/A
ENST00000361200 N/A N/A N/A N/A 1.116±0.00 N/A 5.648±0.00 N/A 0.100±0.00 0.247±0.00 37.384±32.67 N/A 1.315±0.61 2.575±0.00
ENST00000443333 N/A 0.081±0.00 N/A 0.115±0.00 0.493±0.00 N/A 11.877±0.00 N/A N/A N/A 40.988±0.00 0.091±0.04 0.977±0.38 0.130±0.00
ENST00000485151 N/A N/A N/A 0.141±0.00 1.866±0.00 N/A N/A N/A N/A N/A N/A 0.058±0.00 1.110±0.00 1.412±1.27
ENSG00000213068 ENST00000450126 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A 0.038±0.00
ENSG00000227776 ENST00000457236 N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227907 ENST00000417644 N/A N/A N/A N/A 0.272±0.00 2.414±0.00 N/A N/A N/A 0.094±0.00 N/A 0.179±0.00 N/A 1.150±0.02
ENSG00000231029 ENST00000422817 N/A N/A N/A N/A 0.070±0.00 0.064±0.00 N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENSG00000231605 ENST00000426709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A 0.043±0.00
ENST00000428030 0.077±0.00 0.131±0.00 N/A 0.100±0.00 0.269±0.00 0.119±0.00 0.108±0.00 N/A 0.249±0.00 0.170±0.00 0.193±0.00 0.026±0.00 N/A N/A
ENST00000446687 0.030±0.00 0.170±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00
ENST00000457941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233411 ENST00000417969 0.490±0.00 0.735±0.00 N/A 0.121±0.00 0.653±0.00 0.498±0.08 0.365±0.00 0.116±0.00 0.667±0.00 0.454±0.00 0.254±0.00 0.261±0.11 0.141±0.00 0.259±0.00
ENSG00000272033 ENST00000607611 0.055±0.00 0.559±0.00 0.252±0.00 0.449±0.03 0.822±0.72 0.384±0.00 0.057±0.02 0.095±0.08 0.653±0.00 0.647±0.00 0.509±0.00 0.371±0.49 0.028±0.00 0.091±0.03
ENSG00000272205 ENST00000606967 0.137±0.00 0.410±0.00 N/A 0.250±0.07 N/A 0.092±0.00 N/A 0.051±0.00 0.043±0.00 0.438±0.00 N/A 0.461±0.17 0.267±0.00 0.674±0.05
ENSG00000273160 ENST00000610044 0.252±0.00 N/A N/A N/A N/A 0.341±0.00 0.430±0.00 0.033±0.00 0.260±0.12 N/A 0.684±0.00 0.108±0.00 N/A 0.128±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000544 ENSMUST00000027847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 0.324±0.00 N/A N/A
ENSMUST00000060833 0.202±0.17 0.324±0.11 14.805±1.67 0.041±0.00 0.156±0.06 228.196±27.98 N/A 0.157±0.05 0.119±0.02 0.610±0.42 N/A 0.401±0.15 0.161±0.07 0.063±0.03
ENSMUST00000166159 N/A N/A N/A N/A N/A N/A N/A N/A 0.076±0.05 N/A N/A N/A 0.285±0.12 N/A
ENSMUST00000166860 0.182±0.16 0.048±0.00 12.440±0.42 N/A 0.127±0.04 150.848±31.98 N/A 0.051±0.03 0.077±0.07 0.400±0.10 0.020±0.00 0.305±0.19 0.101±0.06 0.081±0.07
ENSMUSG00000005763 ENSMUST00000005907 4.588±0.82 N/A N/A N/A 23.536±5.84 N/A 1.469±0.00 3.910±0.36 N/A 5.962±1.09 1.801±0.38 N/A N/A N/A
ENSMUST00000027849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000086002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.719±0.66
ENSMUST00000178336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026564 ENSMUST00000085992 0.016±0.01 0.066±0.03 0.022±0.01 0.303±0.17 0.517±0.48 0.140±0.04 3.753±1.08 0.100±0.09 0.027±0.02 0.274±0.12 5.511±1.30 0.050±0.03 0.172±0.10 0.136±0.15
ENSMUSG00000026566 ENSMUST00000068705 4.645±2.52 2.594±0.87 N/A 31.277±19.66 3.169±0.76 6.520±0.88 1.212±0.00 6.871±0.86 4.850±2.93 3.282±0.49 0.497±0.24 7.646±1.56 35.133±18.40 6.421±2.10
ENSMUST00000111435 23.384±13.23 7.153±0.99 26.591±11.55 10.121±6.19 8.501±1.56 23.855±3.06 7.355±0.52 12.302±0.31 5.728±4.19 18.392±3.15 1.382±0.39 37.339±11.27 56.278±12.38 7.449±4.25
ENSMUSG00000040629 ENSMUST00000038782 0.027±0.00 N/A 0.005±0.00 0.038±0.02 0.064±0.03 N/A 0.085±0.03 0.078±0.05 0.015±0.01 N/A N/A 0.745±0.31 0.039±0.01 379.864±101.07
ENSMUSG00000040713 ENSMUST00000040298 N/A N/A N/A 16.926±0.00 N/A N/A N/A N/A N/A N/A N/A 72.728±0.00 3685.530±4582.08 15.133±0.00
ENSMUST00000111432 22.441±1.85 58.270±6.71 28.058±1.91 4.351±0.51 37.453±10.61 29.264±5.00 37.700±1.07 44.915±4.58 172.679±83.30 57.581±6.73 20.845±1.09 47.058±22.38 373.256±299.54 14.916±6.23
ENSMUST00000140769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040723 ENSMUST00000040357 3.964±0.18 1.426±0.56 3.543±0.06 0.984±0.48 10.913±3.26 1.625±0.50 21.220±1.52 2.049±0.68 2.935±2.76 5.833±1.67 45.301±3.19 4.037±1.26 4.148±2.03 0.430±0.14
ENSMUST00000097474 2.301±0.80 2.682±0.70 1.557±0.36 1.299±0.63 8.005±7.79 1.511±0.87 5.299±0.53 3.207±0.52 0.933±0.51 14.063±3.31 N/A 4.116±1.31 4.432±5.82 1.074±0.92
ENSMUSG00000088618 ENSMUST00000157993 N/A N/A 21.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000094394 ENSMUST00000178130 1747.050±0.00 N/A N/A N/A 2874.790±0.00 7482.860±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097196 ENSMUST00000181378 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A 0.041±0.03 N/A N/A 0.316±0.20 N/A 0.102±0.04
ENSMUSG00000099008 ENSMUST00000184037 0.045±0.02 0.117±0.01 0.017±0.01 0.307±0.04 0.056±0.02 N/A 0.022±0.01 0.080±0.07 0.046±0.03 0.047±0.01 N/A 0.011±0.00 N/A 0.054±0.02
ENSMUSG00000099515 ENSMUST00000111427 0.933±0.36 1.350±0.32 N/A 2.003±1.51 1.944±0.53 1.411±0.48 0.266±0.04 0.869±0.28 0.868±0.63 1.370±0.26 0.364±0.12 1.850±0.14 1.241±0.56 1.414±0.25

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