C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD247 molecule
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198821 CD247 9606 - 1:167430640-167518610 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000362089 CD247-002 167430640-167518538 protein_coding
  ENST00000392122 CD247-001 167430640-167518610 protein_coding
  ENST00000470379 CD247-006 167431173-167439640 processed_transcript
  ENST00000476733 CD247-005 167431161-167439621 processed_transcript
  ENST00000479979 CD247-004 167439873-167518610 processed_transcript
  ENST00000483825 CD247-003 167430640-167518529 processed_transcript
  ENST00000485089 CD247-007 167430640-167434066 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000362089ENST00000392122ENST00000470379ENST00000476733ENST00000479979ENST00000483825ENST00000485089
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000362089 0.518±0.00 5.938±0.00 N/A 0.162±0.00 0.848±0.27 N/A 0.298±0.00 0.227±0.00 N/A 6.491±5.34 N/A 0.763±0.29 0.624±0.00 0.699±0.00
ENST00000392122 N/A 3.082±0.00 N/A 0.404±0.00 N/A 0.263±0.16 N/A N/A 0.676±0.00 N/A N/A 0.785±0.40 0.570±0.17 0.614±0.00
ENST00000470379 0.215±0.00 3.367±0.00 N/A 0.117±0.00 N/A 1.162±0.00 N/A N/A 0.258±0.00 2.153±0.00 N/A N/A 1.331±0.00 N/A
ENST00000476733 0.393±0.00 N/A N/A N/A N/A N/A 0.178±0.00 0.121±0.00 0.883±0.00 N/A 0.543±0.00 0.743±0.00 1.011±0.00 0.224±0.00
ENST00000479979 N/A N/A 0.056±0.00 N/A 0.306±0.00 0.835±0.00 N/A 0.439±0.00 N/A 0.863±0.00 N/A N/A N/A N/A
ENST00000483825 N/A 1.596±0.00 N/A 0.035±0.00 N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A N/A 0.062±0.00
ENST00000485089 N/A 8.818±0.00 N/A N/A 0.491±0.00 0.638±0.00 N/A 0.441±0.00 N/A N/A 0.555±0.00 N/A N/A 0.359±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UH CIL_0008UH_0001 VISTA 1:167027717-167629809
CIL_00027W CIL_00027W_0002 CGP 1:167220829-167518610

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007166 IEA cell surface receptor signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016032 TAS viral process
GO:0031295 TAS T cell costimulation
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042101 IDA T cell receptor complex
GO:0042105 IEA alpha-beta T cell receptor complex
GO:0042802 IPI identical protein binding
GO:0042803 NAS protein homodimerization activity
GO:0045087 TAS innate immune response
GO:0050690 TAS regulation of defense response to virus by virus
GO:0050776 TAS regulation of immune response
GO:0050852 TAS T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077240 cd247l CD247 antigen like protein_coding Danio_rerio
ENSMUSG00000005763 Cd247 CD247 antigen protein_coding Mus_musculus

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