C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquinol-cytochrome c reductase complex assembly factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005882 Uqcc1 10090 - 2:155846894-155930310 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006036 Uqcc1-013 155848240-155930044 protein_coding
  ENSMUST00000109631 Uqcc1-010 155848259-155930310 protein_coding
  ENSMUST00000109632 Uqcc1-012 155846896-155930043 protein_coding
  ENSMUST00000109636 Uqcc1-001 155846921-155930310 protein_coding
  ENSMUST00000123790 Uqcc1-007 155850903-155930263 retained_intron
  ENSMUST00000133726 Uqcc1-019 155851367-155930043 nonsense_mediated_decay
  ENSMUST00000136933 Uqcc1-002 155846894-155930060 nonsense_mediated_decay
  ENSMUST00000139232 Uqcc1-011 155848450-155930032 protein_coding
  ENSMUST00000141501 Uqcc1-008 155858008-155930050 retained_intron
  ENSMUST00000142655 Uqcc1-006 155909361-155930050 protein_coding
  ENSMUST00000146995 Uqcc1-004 155870764-155930056 processed_transcript
  ENSMUST00000151078 Uqcc1-014 155846896-155930036 nonsense_mediated_decay
  ENSMUST00000152766 Uqcc1-009 155847947-155930018 protein_coding
  ENSMUST00000152818 Uqcc1-003 155846894-155930060 processed_transcript
  ENSMUST00000155680 Uqcc1-005 155907966-155930046 retained_intron
  ENSMUST00000159238 Uqcc1-016 155887107-155930060 protein_coding
  ENSMUST00000161484 Uqcc1-018 155848184-155851692 processed_transcript
  ENSMUST00000162258 Uqcc1-015 155887119-155910604 retained_intron
  ENSMUST00000162749 Uqcc1-017 155887126-155930276 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006036ENSMUST00000109631ENSMUST00000109632ENSMUST00000109636ENSMUST00000123790ENSMUST00000133726ENSMUST00000136933ENSMUST00000139232ENSMUST00000142655ENSMUST00000146995ENSMUST00000151078ENSMUST00000152766ENSMUST00000152818ENSMUST00000155680ENSMUST00000162749
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006036 N/A 12.752±2.20 N/A N/A 5.214±0.00 7.027±0.80 22.740±2.10 12.560±1.72 6.348±1.10 N/A N/A 6.525±0.78 N/A N/A
ENSMUST00000109631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.690±1.31
ENSMUST00000109632 N/A 5.765±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109636 2.716±0.00 N/A 2.035±0.00 N/A N/A 1.663±0.00 N/A N/A 1.265±0.16 N/A 9.231±2.50 N/A N/A 4.566±0.78
ENSMUST00000123790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.289±0.00 N/A N/A
ENSMUST00000133726 N/A 14.868±0.00 N/A N/A 6.145±0.00 N/A N/A N/A 7.796±0.00 N/A N/A 9.376±0.04 13.227±0.00 N/A
ENSMUST00000136933 5.024±0.90 6.033±1.75 4.615±1.83 3.781±0.08 3.998±2.19 6.236±0.72 25.334±2.48 12.397±2.49 2.954±1.21 6.082±2.74 6.198±0.09 2.163±0.82 4.765±2.26 N/A
ENSMUST00000139232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.331±0.00 5.760±0.63 N/A
ENSMUST00000142655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.148±0.00 N/A
ENSMUST00000146995 13.835±1.99 13.883±0.59 13.810±1.12 10.310±3.28 21.291±10.61 9.112±0.92 48.614±7.78 19.516±5.44 10.495±2.26 7.373±0.97 32.400±6.52 10.834±3.43 17.344±3.50 18.604±1.15
ENSMUST00000151078 3.449±0.45 N/A 5.499±2.16 3.239±0.00 N/A N/A N/A N/A 4.389±1.31 N/A 10.604±2.07 N/A 3.612±1.26 N/A
ENSMUST00000152766 N/A N/A N/A 4.436±0.00 N/A N/A N/A N/A N/A N/A 11.901±0.00 6.854±1.90 5.074±0.88 4.593±1.20
ENSMUST00000152818 N/A 6.323±0.00 N/A N/A N/A 3.229±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.377±0.00 N/A N/A
ENSMUST00000162749 N/A N/A N/A 7.341±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0006RU CIL_0006RU_0003 CGP 2:155827548-155930310
CIL_0005FR CIL_0005FR_0002 CGP 2:155846894-155942750

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0008150 ND biological_process
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0034551 ISS mitochondrial respiratory chain complex III assembly
GO:0070131 ISS positive regulation of mitochondrial translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068176 uqcc1 ubiquinol-cytochrome c reductase complex assembly factor 1 protein_coding Danio_rerio
ENSG00000101019 UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1 protein_coding Homo_sapiens

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