C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquinol-cytochrome c reductase complex assembly factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136933 Uqcc1-002 ENSMUSG00000005882 10090 - 2:155846894-155930060 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000136933
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000136933 5.024±0.90 6.033±1.75 4.615±1.83 3.781±0.08 3.998±2.19 6.236±0.72 25.334±2.48 12.397±2.49 2.954±1.21 6.082±2.74 6.198±0.09 2.163±0.82 4.765±2.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0006RU CIL_0006RU_0003 CGP 2:155827548-155930310
CIL_0005FR CIL_0005FR_0002 CGP 2:155846894-155942750

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016023 IDA cytoplasmic membrane-bounded vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349714 UQCC1-017 protein_coding Homo_sapiens 0 739
ENST00000359226 UQCC1-006 protein_coding Homo_sapiens 0 462
ENST00000374380 UQCC1-018 protein_coding Homo_sapiens 0 824
ENST00000374384 UQCC1-012 protein_coding Homo_sapiens 0 604
ENST00000374385 UQCC1-010 protein_coding Homo_sapiens 0 1134
ENST00000374394 UQCC1-011 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000397553 UQCC1-021 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000397554 UQCC1-005 protein_coding Homo_sapiens 0 606
ENST00000397556 UQCC1-201 protein_coding Homo_sapiens 0 739
ENST00000424405 UQCC1-003 protein_coding Homo_sapiens 0 809
ENST00000438533 UQCC1-007 protein_coding Homo_sapiens 0 628
ENST00000443429 UQCC1-004 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000453855 UQCC1-009 nonsense_mediated_decay Homo_sapiens 5.60519e-45 185
ENST00000457259 UQCC1-002 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000472559 UQCC1-014 retained_intron Homo_sapiens 0 462
ENST00000491040 UQCC1-022 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000491125 UQCC1-001 processed_transcript Homo_sapiens 0 603

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