C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquinol-cytochrome c reductase complex assembly factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006036 Uqcc1-013 ENSMUSG00000005882 10090 - 2:155848240-155930044 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverOvaryENSMUST00000006036
Transcript ID Adrenal Breast Colon Heart Kidney Liver Ovary
ENSMUST00000006036 12.752±2.20 5.214±0.00 7.027±0.80 22.740±2.10 12.560±1.72 6.348±1.10 6.525±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0006RU CIL_0006RU_0003 CGP 2:155827548-155930310
CIL_0005FR CIL_0005FR_0002 CGP 2:155846894-155942750

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016023 IDA cytoplasmic membrane-bounded vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349714 UQCC1-017 protein_coding Homo_sapiens 0 287
ENST00000359226 UQCC1-006 protein_coding Homo_sapiens 0 826
ENST00000374380 UQCC1-018 protein_coding Homo_sapiens 3e-36 158
ENST00000374384 UQCC1-012 protein_coding Homo_sapiens 0 313
ENST00000374385 UQCC1-010 protein_coding Homo_sapiens 0 313
ENST00000374394 UQCC1-011 nonsense_mediated_decay Homo_sapiens 0.0000009 60
ENST00000397553 UQCC1-021 nonsense_mediated_decay Homo_sapiens 7e-37 158
ENST00000397554 UQCC1-005 protein_coding Homo_sapiens 0 313
ENST00000424405 UQCC1-003 protein_coding Homo_sapiens 1e-36 158
ENST00000438533 UQCC1-007 protein_coding Homo_sapiens 3e-36 156
ENST00000443429 UQCC1-004 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000453855 UQCC1-009 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000457259 UQCC1-002 nonsense_mediated_decay Homo_sapiens 1e-29 135
ENST00000491040 UQCC1-022 nonsense_mediated_decay Homo_sapiens 1e-36 158
ENST00000491125 UQCC1-001 processed_transcript Homo_sapiens 0 313

Loading