C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006333 Rps9 10090 + 7:3703993-3706901 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006496 Rps9-001 3703993-3706901 protein_coding
  ENSMUST00000108623 Rps9-002 3704038-3706895 protein_coding
  ENSMUST00000108624 Rps9-003 3704320-3706876 protein_coding
  ENSMUST00000108625 Rps9-008 3704052-3706857 protein_coding
  ENSMUST00000126562 Rps9-004 3704325-3706381 protein_coding
  ENSMUST00000128729 Rps9-005 3704041-3704877 retained_intron
  ENSMUST00000136858 Rps9-010 3705616-3706228 retained_intron
  ENSMUST00000139818 Rps9-006 3704042-3704721 protein_coding
  ENSMUST00000146303 Rps9-007 3704048-3705429 retained_intron
  ENSMUST00000146927 Rps9-009 3704364-3706894 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006496ENSMUST00000108623ENSMUST00000128729
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006496 463.573±144.17 212.686±16.50 531.332±28.62 383.278±158.68 400.058±151.84 451.324±41.81 224.958±41.50 364.736±48.55 464.075±293.04 394.465±7.15 362.659±27.37 765.824±238.47 532.684±236.97 204.113±24.02
ENSMUST00000108623 N/A N/A N/A N/A 8.464±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128729 374.600±68.96 N/A 498.971±95.27 415.522±0.00 252.028±15.78 225.677±23.02 103.437±10.87 172.128±27.25 411.244±88.09 178.506±15.92 N/A 588.327±181.35 257.452±0.00 100.407±8.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005M6 CIL_0005M6_0002 CGP 7:3693375-3706901

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0006412 IEA translation
GO:0006417 IEA regulation of translation
GO:0008284 IEA positive regulation of cell proliferation
GO:0015935 IEA small ribosomal subunit
GO:0016020 IEA membrane
GO:0019843 IEA rRNA binding
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0030529 ISS ribonucleoprotein complex
GO:0044822 IEA poly(A) RNA binding
GO:0045182 IEA translation regulator activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011405 rps9 ribosomal protein S9 protein_coding Danio_rerio
ENSG00000170889 RPS9 ribosomal protein S9 protein_coding Homo_sapiens

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