C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006496 Rps9-001 ENSMUSG00000006333 10090 + 7:3703993-3706901 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006496
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006496 463.573±144.17 212.686±16.50 531.332±28.62 383.278±158.68 400.058±151.84 451.324±41.81 224.958±41.50 364.736±48.55 464.075±293.04 394.465±7.15 362.659±27.37 765.824±238.47 532.684±236.97 204.113±24.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005M6 CIL_0005M6_0002 CGP 7:3693375-3706901

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0006412 IEA translation
GO:0019843 IEA rRNA binding
GO:0030529 ISS ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302907 RPS9-003 protein_coding Homo_sapiens 0 712
ENST00000391751 RPS9-012 protein_coding Homo_sapiens 0 217
ENST00000391752 RPS9-001 protein_coding Homo_sapiens 0 706
ENST00000391753 RPS9-010 protein_coding Homo_sapiens 0 710
ENST00000402367 RPS9-006 protein_coding Homo_sapiens 0 494
ENST00000418783 RP11-12M9.3-001 processed_pseudogene Homo_sapiens 0 638
ENST00000419943 RPS9P1-001 processed_pseudogene Homo_sapiens 0 483
ENST00000436445 RPS9-009 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000441429 RPS9-004 protein_coding Homo_sapiens 0 496
ENST00000445961 RPS9-007 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000484121 RPS9-008 retained_intron Homo_sapiens 0 501
ENST00000495002 RPS9-005 retained_intron Homo_sapiens 0 499
ENST00000498085 CTB-33G10.1-001 processed_pseudogene Homo_sapiens 0 597
ENST00000610644 RPS9-007 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000610765 RPS9-007 retained_intron Homo_sapiens 0 494
ENST00000610796 RPS9-008 retained_intron Homo_sapiens 0 499
ENST00000610799 RPS9-005 retained_intron Homo_sapiens 0 499
ENST00000610826 RPS9-001 protein_coding Homo_sapiens 0 706
ENST00000610850 RPS9-013 retained_intron Homo_sapiens 0 222
ENST00000610953 RPS9-208 protein_coding Homo_sapiens 0 712
ENST00000611572 RPS9-004 protein_coding Homo_sapiens 0 496
ENST00000611921 RPS9-002 protein_coding Homo_sapiens 0 710
ENST00000614070 RPS9-008 retained_intron Homo_sapiens 0 499
ENST00000614095 RPS9-006 protein_coding Homo_sapiens 0 494
ENST00000614737 RPS9-003 protein_coding Homo_sapiens 0 712
ENST00000615013 RPS9-010 processed_transcript Homo_sapiens 0 351
ENST00000615167 RPS9-012 protein_coding Homo_sapiens 0 217
ENST00000615346 RPS9-002 protein_coding Homo_sapiens 0 704
ENST00000616082 RPS9-203 protein_coding Homo_sapiens 0 706
ENST00000616107 RPS9-005 retained_intron Homo_sapiens 0 501
ENST00000616290 RPS9-007 retained_intron Homo_sapiens 0 494
ENST00000616536 RPS9-001 protein_coding Homo_sapiens 0 706
ENST00000616625 RPS9-006 retained_intron Homo_sapiens 0 499
ENST00000616839 RPS9-207 protein_coding Homo_sapiens 0 712
ENST00000616877 RPS9-204 protein_coding Homo_sapiens 0 712
ENST00000616928 RPS9-202 protein_coding Homo_sapiens 0 712
ENST00000617291 RPS9-201 protein_coding Homo_sapiens 0 712
ENST00000617485 RPS9-006 retained_intron Homo_sapiens 0 499
ENST00000618690 RPS9-010 processed_transcript Homo_sapiens 0 357
ENST00000618751 RPS9-205 protein_coding Homo_sapiens 0 712
ENST00000619229 RPS9-010 protein_coding Homo_sapiens 0 710
ENST00000619600 RPS9-009 retained_intron Homo_sapiens 0 497
ENST00000620540 RPS9-003 processed_transcript Homo_sapiens 0 497
ENST00000620720 RPS9-206 protein_coding Homo_sapiens 0 712
ENST00000620740 RPS9-009 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000620940 RPS9-001 protein_coding Homo_sapiens 0 701
ENST00000621001 RPS9-013 retained_intron Homo_sapiens 0 222
ENST00000621080 RPS9-003 processed_transcript Homo_sapiens 0 497
ENST00000621233 RPS9-008 retained_intron Homo_sapiens 0 501
ENST00000621621 RPS9-009 retained_intron Homo_sapiens 0 497
ENST00000621749 RPS9-005 retained_intron Homo_sapiens 0 501

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