C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: actinin alpha 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006457 Actn3 10090 - 19:4861223-4877909 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006626 Actn3-001 4861223-4877909 protein_coding
  ENSMUST00000138811 Actn3-002 4861223-4863558 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006626ENSMUST00000138811
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006626 0.485±0.05 0.111±0.14 0.379±0.16 0.441±0.12 139.169±143.70 0.231±0.06 0.136±0.05 2.858±2.13 0.139±0.12 3.063±2.93 2616.819±114.24 0.969±0.22 0.233±0.21 2.181±0.75
ENSMUST00000138811 N/A 0.074±0.02 0.702±0.00 N/A 36.658±51.73 0.118±0.01 0.146±0.07 0.216±0.06 0.055±0.02 2.404±1.61 N/A 0.895±0.36 0.122±0.00 2.283±1.35

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005865 TAS striated muscle thin filament
GO:0006936 IDA muscle contraction
GO:0030017 IDA sarcomere
GO:0030018 IDA Z disc
GO:0030674 TAS protein binding, bridging
GO:0042803 TAS protein homodimerization activity
GO:0051015 IDA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001431 actn3b actinin alpha 3b protein_coding Danio_rerio
ENSDARG00000013755 actn3a actinin alpha 3a protein_coding Danio_rerio
ENSG00000248746 ACTN3 actinin, alpha 3 (gene/pseudogene) protein_coding Homo_sapiens

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