C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006998 Psmd2 10090 + 16:20651652-20663414 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000007212 Psmd2-001 20651652-20663414 protein_coding
  ENSMUST00000166071 Psmd2-006 20659352-20660368 processed_transcript
  ENSMUST00000167869 Psmd2-005 20659007-20659716 processed_transcript
  ENSMUST00000169184 Psmd2-007 20659419-20662109 processed_transcript
  ENSMUST00000169195 Psmd2-004 20651716-20652754 processed_transcript
  ENSMUST00000172207 Psmd2-002 20651704-20663414 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007212ENSMUST00000166071
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007212 58.757±2.07 27.240±2.09 57.007±4.68 72.171±17.13 43.630±18.85 37.251±4.93 50.499±6.30 43.558±6.09 65.503±16.22 48.530±4.77 80.984±2.19 63.973±10.10 86.711±27.36 130.519±31.74
ENSMUST00000166071 N/A N/A N/A 92.835±0.00 N/A N/A N/A N/A N/A N/A N/A 179.389±0.00 182.767±57.65 355.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000571 CIL_000571_0002 CGP 16:20619215-20663414
CIL_000572 CIL_000572_0002 CGP 16:20651652-20692884

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IDA proteasome complex
GO:0005515 IPI protein binding
GO:0005838 IDA proteasome regulatory particle
GO:0022624 IDA proteasome accessory complex
GO:0030234 IEA enzyme regulator activity
GO:0042176 IEA regulation of protein catabolic process
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087758 PSMD2 (1 of 2) proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 protein_coding Danio_rerio
ENSDARG00000088574 psmd2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 protein_coding Danio_rerio
ENSG00000175166 PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 protein_coding Homo_sapiens

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