C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptogyrin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000007021 Syngr3 10090 - 17:24685092-24689955 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000007236 Syngr3-001 24685092-24689955 protein_coding
  ENSMUST00000130936 Syngr3-002 24686633-24688199 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007236ENSMUST00000130936
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007236 0.183±0.08 1.577±0.53 0.280±0.01 31.258±4.18 0.257±0.07 2.089±0.34 0.241±0.07 0.307±0.09 0.056±0.02 0.249±0.10 0.046±0.01 0.551±0.32 0.100±0.06 0.091±0.05
ENSMUST00000130936 N/A N/A N/A N/A N/A N/A N/A N/A 0.452±0.00 N/A N/A N/A N/A 0.406±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008021 IDA synaptic vesicle
GO:0016021 IEA integral component of membrane
GO:0021762 IEA substantia nigra development
GO:0030054 IEA cell junction
GO:0031594 IDA neuromuscular junction
GO:0032411 IMP positive regulation of transporter activity
GO:0042169 IDA SH2 domain binding
GO:0045202 IDA synapse
GO:0047485 IPI protein N-terminus binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014871 syngr3a synaptogyrin 3a protein_coding Danio_rerio
ENSDARG00000025034 syngr3b synaptogyrin 3b protein_coding Danio_rerio
ENSG00000127561 SYNGR3 synaptogyrin 3 protein_coding Homo_sapiens

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