C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: actin related protein 2/3 complex, subunit 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000008475 Arpc5 10090 + 1:152766542-152775597 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077755 Arpc5-001 152766542-152775597 protein_coding
  ENSMUST00000097536 Arpc5-003 152766542-152775597 protein_coding
  ENSMUST00000143008 Arpc5-002 152768499-152774395 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077755ENSMUST00000097536ENSMUST00000143008
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077755 46.653±3.99 9.632±3.36 58.258±6.09 50.252±22.99 36.068±7.26 67.746±13.32 12.275±2.50 36.543±1.72 40.661±22.37 61.261±2.25 5.627±1.63 31.806±5.46 83.528±44.76 10.100±4.24
ENSMUST00000097536 16.934±0.06 7.853±2.77 6.727±0.00 N/A 43.307±21.56 39.932±17.66 2.351±0.22 11.964±6.81 4.412±0.64 30.008±8.58 N/A 24.729±12.36 N/A 2.884±0.00
ENSMUST00000143008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.865±0.00 49.094±0.00 2.625±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005885 TAS Arp2/3 protein complex
GO:0030027 IDA lamellipodium
GO:0030833 IEA regulation of actin filament polymerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019062 arpc5b actin related protein 2/3 complex, subunit 5B protein_coding Danio_rerio
ENSDARG00000039142 arpc5a actin related protein 2/3 complex, subunit 5A protein_coding Danio_rerio
ENSG00000162704 ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa protein_coding Homo_sapiens

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