C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin related protein 2/3 complex, subunit 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077755 Arpc5-001 ENSMUSG00000008475 10090 + 1:152766542-152775597 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077755
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077755 46.653±3.99 9.632±3.36 58.258±6.09 50.252±22.99 36.068±7.26 67.746±13.32 12.275±2.50 36.543±1.72 40.661±22.37 61.261±2.25 5.627±1.63 31.806±5.46 83.528±44.76 10.100±4.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005885 TAS Arp2/3 protein complex
GO:0030027 IDA lamellipodium
GO:0030833 IEA regulation of actin filament polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294742 ARPC5-002 protein_coding Homo_sapiens 0 1053
ENST00000359856 ARPC5-001 protein_coding Homo_sapiens 0 1096
ENST00000367534 ARPC5-004 protein_coding Homo_sapiens 0 562
ENST00000462965 ARPC5-003 processed_transcript Homo_sapiens 0 869

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