C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, matrin type 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009220 Zmat5-001 ENSMUSG00000009076 10090 + 11:4704678-4737669 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009220
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009220 5.143±1.47 7.738±4.33 21.206±3.20 13.401±5.35 7.871±3.44 12.107±2.57 9.953±0.77 13.493±3.98 5.774±3.41 10.977±3.87 8.236±2.34 10.476±3.21 9.464±2.89 7.081±2.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029V CIL_00029V_0002 CGP 11:4704678-4746778

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005689 ISS U12-type spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216144 CABP7-001 protein_coding Homo_sapiens 3e-38 165
ENST00000344318 ZMAT5-001 protein_coding Homo_sapiens 0 702
ENST00000489010 ZMAT5-002 retained_intron Homo_sapiens 0 213

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