C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: POU domain, class 6, transcription factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009739 Pou6f1 10090 - 15:100575318-100599984 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058274 Pou6f1-201 100578247-100595034 protein_coding
  ENSMUST00000073837 Pou6f1-001 100575318-100599984 protein_coding
  ENSMUST00000176140 Pou6f1-004 100575318-100591934 nonsense_mediated_decay
  ENSMUST00000176271 Pou6f1-005 100575318-100592037 retained_intron
  ENSMUST00000176300 Pou6f1-003 100578247-100595034 nonsense_mediated_decay
  ENSMUST00000176492 Pou6f1-006 100577273-100584238 retained_intron
  ENSMUST00000177202 Pou6f1-002 100578247-100595034 nonsense_mediated_decay
  ENSMUST00000177247 Pou6f1-008 100586616-100599864 protein_coding
  ENSMUST00000177335 Pou6f1-007 100575321-100580231 retained_intron
  ENSMUST00000177505 Pou6f1-009 100588625-100599864 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000073837ENSMUST00000176140ENSMUST00000176271ENSMUST00000176492ENSMUST00000177202ENSMUST00000177335
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073837 2.178±0.00 2.212±0.43 1.931±0.16 10.569±2.49 2.962±0.75 0.663±0.07 0.765±0.36 0.215±0.14 2.251±0.68 0.803±0.22 3.539±2.10 0.177±0.00 N/A
ENSMUST00000176140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.753±0.00 0.270±0.16 N/A
ENSMUST00000176271 N/A 1.076±0.00 N/A N/A 1.154±0.00 0.647±0.14 N/A N/A N/A N/A N/A 0.106±0.00 N/A
ENSMUST00000176492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.584±0.00
ENSMUST00000177202 N/A 1.328±0.00 N/A N/A 3.262±0.69 N/A N/A 0.199±0.00 N/A N/A N/A 0.452±0.00 N/A
ENSMUST00000177335 3.977±1.31 N/A 4.345±0.42 6.702±1.99 3.680±0.00 1.299±0.00 0.790±0.09 0.285±0.25 2.691±0.00 0.992±0.00 3.619±1.71 0.233±0.12 15.661±5.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033K CIL_00033K_0003 CGP 15:100502799-100599984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011570 pou6f1 POU class 6 homeobox 1 protein_coding Danio_rerio
ENSG00000184271 POU6F1 POU class 6 homeobox 1 protein_coding Homo_sapiens

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