C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00033K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060306-ENSDARG00000011570 CGP 7955 23:33870676-33923700
GeneTranscriptPositionBiotype
ENSDARG00000011570 (pou6f1)
POU class 6 homeobox 1 		ENSDART00000011925 (pou6f1-201) 33895348-33916488 protein_coding
ENSDART00000130338 (pou6f1-001) 33895348-33923700 protein_coding
ENSDART00000143333 (pou6f1-002) 33912988-33923635 protein_coding
ENSDARG00000060306 (tfcp2)
transcription factor CP2 		ENSDART00000084848 (tfcp2-201) 33870683-33893157 protein_coding
ENSDART00000138416 (tfcp2-001) 33870676-33893936 protein_coding
ENSDART00000140107 (tfcp2-002) 33871678-33880575 retained_intron
CIL_00033K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135457-ENSG00000184271 CGP 9606 12:51093663-51217693
GeneTranscriptPositionBiotype
ENSG00000135457 (TFCP2)
transcription factor CP2 		ENST00000257915 (TFCP2-001) 51093663-51172881 protein_coding
ENST00000546822 (TFCP2-007) 51095158-51103931 retained_intron
ENST00000548108 (TFCP2-005) 51096023-51172793 protein_coding
ENST00000548115 (TFCP2-004) 51095222-51172912 protein_coding
ENST00000549867 (TFCP2-002) 51094883-51173134 protein_coding
ENSG00000184271 (POU6F1)
POU class 6 homeobox 1 		ENST00000333640 (POU6F1-002) 51189161-51198167 protein_coding
ENST00000389243 (POU6F1-001) 51186936-51217693 protein_coding
ENST00000546685 (POU6F1-006) 51198640-51217667 processed_transcript
ENST00000547854 (POU6F1-005) 51204321-51207693 processed_transcript
ENST00000547855 (POU6F1-007) 51196131-51197785 protein_coding
ENST00000548692 (POU6F1-009) 51198699-51204368 processed_transcript
ENST00000549309 (POU6F1-004) 51197975-51217693 processed_transcript
ENST00000550824 (POU6F1-003) 51189161-51197035 protein_coding
ENST00000552305 (POU6F1-008) 51192390-51198028 processed_transcript
ENSG00000200953 (Y_RNA)
Y RNA 		ENST00000364083 (Y_RNA.1-403) 51156868-51156977 misc_RNA
ENSG00000244540 (RP11-416A17.1)
 ENST00000469738 (RP11-416A17.1-001) 51106817-51107144 processed_pseudogene
ENSG00000257246 (RP11-416A17.6)
 ENST00000547512 (RP11-416A17.6-001) 51124628-51125381 processed_pseudogene
ENSG00000278126 (RP11-454E5.4)
 ENST00000620274 (RP11-454E5.4-001) 51201684-51202581 sense_intronic
CIL_00033K_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000009733-ENSMUSG00000009739 CGP 10090 15:100502799-100599984
GeneTranscriptPositionBiotype
ENSMUSG00000009733 (Tfcp2)
transcription factor CP2 		ENSMUST00000009877 (Tfcp2-201) 100502799-100552008 protein_coding
ENSMUSG00000098620 (Gm27209)
predicted gene 27209 		ENSMUST00000183834 (Gm27209-001) 100595416-100597293 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033K_0001ENSDARG00000011570ENSDART00000011925ENSDART00000130338ENSDART00000143333ENSDARG00000060306ENSDART00000084848ENSDART00000138416ENSDART00000140107CIL_00033K_0002ENSG00000135457ENST00000257915ENST00000546822ENST00000548108ENST00000548115ENST00000549867ENSG00000184271ENST00000333640ENST00000389243ENST00000546685ENST00000547854ENST00000547855ENST00000548692ENST00000549309ENST00000550824ENST00000552305ENSG00000200953ENST00000364083ENSG00000244540ENST00000469738ENSG00000257246ENST00000547512ENSG00000278126ENST00000620274CIL_00033K_0003ENSMUSG00000009733ENSMUST00000009877ENSMUSG00000098620ENSMUST00000183834
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033K_0001ENSDARG00000011570ENSDART00000011925ENSDART00000130338ENSDART00000143333ENSDARG00000060306ENSDART00000084848ENSDART00000138416CIL_00033K_0002ENSG00000135457ENST00000257915ENST00000548108ENST00000548115ENST00000549867ENSG00000184271ENST00000333640ENST00000389243ENST00000546685ENST00000547854ENST00000550824ENSG00000200953ENST00000364083ENSG00000244540ENST00000469738ENSG00000257246ENST00000547512ENSG00000278126ENST00000620274CIL_00033K_0003ENSMUSG00000009733ENSMUST00000009877ENSMUSG00000098620ENSMUST00000183834
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011570 ENSDART00000011925 N/A N/A N/A 4.232±1.90 N/A N/A 1.983±0.23 1.774±0.45 N/A N/A N/A N/A N/A N/A
ENSDART00000130338 N/A N/A N/A 1.024±0.00 N/A N/A 0.881±0.00 0.658±0.00 0.112±0.00 N/A 0.234±0.00 N/A N/A N/A
ENSDART00000143333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.032±0.00 N/A N/A N/A
ENSDARG00000060306 ENSDART00000084848 N/A N/A N/A 5.398±2.00 N/A N/A 1.240±0.89 N/A 2.030±0.00 N/A 3.583±0.00 N/A N/A N/A
ENSDART00000138416 N/A N/A N/A 5.237±2.30 N/A N/A 2.930±1.94 3.865±3.94 1.373±0.00 N/A 1.345±0.00 N/A N/A N/A
ENSDART00000140107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135457 ENST00000257915 1.954±0.00 1.948±0.00 0.826±0.00 0.977±0.00 1.252±0.27 2.374±0.00 1.058±0.00 3.879±0.00 0.219±0.00 0.847±0.03 N/A 4.607±2.62 2.903±0.44 1.049±0.12
ENST00000546822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548108 N/A N/A 3.322±0.00 N/A 1.171±0.00 2.774±0.00 0.429±0.00 0.395±0.00 0.952±0.43 N/A 1.638±0.00 N/A N/A N/A
ENST00000548115 2.620±0.00 2.675±0.00 N/A 3.438±0.00 4.589±0.00 4.123±0.00 1.720±1.46 1.763±0.00 N/A N/A 3.653±0.00 5.389±0.00 N/A 3.457±0.00
ENST00000549867 1.734±0.00 N/A N/A N/A N/A 3.847±0.00 2.618±0.00 4.809±0.00 0.731±0.00 2.568±0.00 2.487±0.00 3.234±0.00 2.400±0.20 2.481±0.00
ENSG00000184271 ENST00000333640 4.595±0.00 2.166±0.00 N/A 3.363±0.69 2.502±0.00 2.780±2.55 0.781±0.00 2.167±0.00 0.151±0.00 2.494±2.13 3.046±0.00 2.686±2.58 0.932±0.27 1.003±0.00
ENST00000389243 N/A 1.015±0.00 N/A 1.392±0.00 N/A N/A N/A N/A 0.269±0.00 N/A N/A 2.196±2.02 N/A 0.634±0.00
ENST00000546685 N/A N/A N/A N/A N/A N/A N/A 2.098±0.00 N/A N/A N/A N/A N/A N/A
ENST00000547854 N/A N/A N/A N/A N/A 0.320±0.00 N/A N/A N/A N/A N/A 0.876±0.00 N/A N/A
ENST00000547855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550824 N/A 1.966±0.00 0.396±0.00 N/A 1.406±0.00 N/A 0.245±0.17 0.155±0.00 0.348±0.06 1.643±0.49 1.381±0.95 1.744±1.40 0.797±0.31 1.091±0.29
ENST00000552305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200953 ENST00000364083 0.289±0.00 N/A N/A 0.140±0.00 2.307±0.00 69.140±0.00 N/A 0.820±0.00 0.638±0.00 N/A N/A N/A N/A 0.657±0.00
ENSG00000244540 ENST00000469738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.153±1.02 N/A 0.083±0.00
ENSG00000257246 ENST00000547512 0.085±0.00 0.204±0.00 0.552±0.00 0.123±0.00 0.287±0.07 0.122±0.01 0.115±0.03 0.023±0.00 0.522±0.50 0.042±0.00 0.137±0.00 0.282±0.16 0.112±0.00 0.306±0.04
ENSG00000278126 ENST00000620274 0.894±0.00 2.309±0.00 0.047±0.00 1.228±1.06 1.392±0.00 0.948±0.00 0.474±0.35 1.675±0.00 0.207±0.03 1.841±0.00 0.538±0.17 0.724±0.64 0.400±0.03 0.781±0.66
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009733 ENSMUST00000009877 0.839±0.30 N/A 3.783±1.15 5.953±2.65 1.994±0.85 1.345±0.60 0.731±0.32 3.035±2.03 1.156±0.42 1.527±0.73 0.797±0.37 4.635±1.51 1.358±0.63 1.915±1.29
ENSMUSG00000098620 ENSMUST00000183834 0.125±0.05 N/A 0.174±0.02 0.383±0.18 0.165±0.06 0.149±0.00 0.101±0.05 0.111±0.05 0.025±0.01 0.101±0.03 0.121±0.07 0.705±0.27 0.075±0.06 0.071±0.03

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