C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: POU class 6 homeobox 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184271 POU6F1 9606 - 12:51186936-51217693 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333640 POU6F1-002 51189161-51198167 protein_coding
  ENST00000389243 POU6F1-001 51186936-51217693 protein_coding
  ENST00000546685 POU6F1-006 51198640-51217667 processed_transcript
  ENST00000547854 POU6F1-005 51204321-51207693 processed_transcript
  ENST00000547855 POU6F1-007 51196131-51197785 protein_coding
  ENST00000548692 POU6F1-009 51198699-51204368 processed_transcript
  ENST00000549309 POU6F1-004 51197975-51217693 processed_transcript
  ENST00000550824 POU6F1-003 51189161-51197035 protein_coding
  ENST00000552305 POU6F1-008 51192390-51198028 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333640ENST00000389243ENST00000546685ENST00000547854ENST00000550824
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333640 4.595±0.00 2.166±0.00 N/A 3.363±0.69 2.502±0.00 2.780±2.55 0.781±0.00 2.167±0.00 0.151±0.00 2.494±2.13 3.046±0.00 2.686±2.58 0.932±0.27 1.003±0.00
ENST00000389243 N/A 1.015±0.00 N/A 1.392±0.00 N/A N/A N/A N/A 0.269±0.00 N/A N/A 2.196±2.02 N/A 0.634±0.00
ENST00000546685 N/A N/A N/A N/A N/A N/A N/A 2.098±0.00 N/A N/A N/A N/A N/A N/A
ENST00000547854 N/A N/A N/A N/A N/A 0.320±0.00 N/A N/A N/A N/A N/A 0.876±0.00 N/A N/A
ENST00000550824 N/A 1.966±0.00 0.396±0.00 N/A 1.406±0.00 N/A 0.245±0.17 0.155±0.00 0.348±0.06 1.643±0.49 1.381±0.95 1.744±1.40 0.797±0.31 1.091±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033K CIL_00033K_0002 CGP 12:51093663-51217693
CIL_00033P CIL_00033P_0002 CGP 12:51186936-51271362

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007420 TAS brain development
GO:0007507 TAS heart development
GO:0007517 TAS muscle organ development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011570 pou6f1 POU class 6 homeobox 1 protein_coding Danio_rerio
ENSMUSG00000009739 Pou6f1 POU domain, class 6, transcription factor 1 protein_coding Mus_musculus
ENSMUSG00000098598 Pou6f1 POU domain, class 6, transcription factor 1 protein_coding Mus_musculus

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