C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BCL2/adenovirus E1B interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000011958 Bnip2 10090 + 9:69989466-70008317 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034754 Bnip2-001 69989466-70008317 protein_coding
  ENSMUST00000085393 Bnip2-002 69989504-70008255 protein_coding
  ENSMUST00000117450 Bnip2-003 69989515-70004007 protein_coding
  ENSMUST00000133307 Bnip2-005 69998232-70003637 processed_transcript
  ENSMUST00000137472 Bnip2-007 70003379-70004763 protein_coding
  ENSMUST00000143049 Bnip2-006 69997176-70002238 retained_intron
  ENSMUST00000154772 Bnip2-004 69989517-69999158 nonsense_mediated_decay
  ENSMUST00000165389 Bnip2-201 69995478-70007115 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034754ENSMUST00000085393ENSMUST00000117450ENSMUST00000154772ENSMUST00000165389
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034754 2.650±0.00 5.362±1.51 22.014±0.74 4.006±1.27 4.807±0.38 2.181±0.17 5.832±0.88 1.954±0.20 5.282±1.51 4.841±0.25 19.777±2.67 9.320±4.54 5.387±2.04 2.672±0.39
ENSMUST00000085393 17.695±1.49 11.064±3.46 27.866±4.75 21.089±11.77 15.917±1.42 10.792±1.38 15.700±1.69 10.070±1.22 12.933±2.46 35.003±4.02 N/A 16.886±3.30 19.791±2.79 11.339±1.13
ENSMUST00000117450 8.349±1.20 5.329±1.05 N/A N/A 5.532±1.73 2.698±0.00 3.666±0.00 2.954±0.32 1.989±0.00 7.104±0.99 N/A 7.894±1.66 N/A N/A
ENSMUST00000154772 N/A 15.878±5.49 N/A N/A N/A 6.069±0.80 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.980±0.00 19.689±0.00 23.414±1.44 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001824 IMP blastocyst development
GO:0005515 IEA protein binding
GO:0005635 ISS nuclear envelope
GO:0005737 IEA cytoplasm
GO:0005814 IDA centriole
GO:0005829 IBA cytosol
GO:0006915 IBA apoptotic process
GO:0031616 IDA spindle pole centrosome
GO:0042802 IBA identical protein binding
GO:0043231 ISS intracellular membrane-bounded organelle
GO:0043410 IMP positive regulation of MAPK cascade
GO:0045666 IMP positive regulation of neuron differentiation
GO:0051057 IMP positive regulation of small GTPase mediated signal transduction
GO:0051146 IGI striated muscle cell differentiation
GO:0051297 IMP centrosome organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013397 bnip2 BCL2/adenovirus E1B interacting protein 2 protein_coding Danio_rerio
ENSG00000140299 BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 protein_coding Homo_sapiens

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